Pairwise Alignments

Query, 271 a.a., hypothetical protein from Bifidobacterium breve UCC2003

Subject, 280 a.a., ABC transporter ATP-binding protein from Herbaspirillum seropedicae SmR1

 Score =  100 bits (249), Expect = 3e-26
 Identities = 78/255 (30%), Positives = 126/255 (49%), Gaps = 18/255 (7%)

Query: 3   IELQALEHAYP---------GGDKALDGVDLTLDGNEPVAIIGQNGAGKTTLVKHFNGIL 53
           +EL AL   YP         G  KA++ V L L   E + ++G++G GK+TL K   G+L
Sbjct: 16  LELCALTKVYPLKRGLFQPPGQLKAVNDVSLRLYRGETLGLVGESGCGKSTLAKMLLGLL 75

Query: 54  RPTGGKVLINGIDVNERSTAEWSRSVGYVFQNPDDQLFLESVRKEFEFGPRQI-GMGDQD 112
            PT G VLING +V+       +R +  +FQ+P   L       E    P ++ G+G+  
Sbjct: 76  PPTSGNVLINGQEVDPTERKAHARHIQPIFQDPYSSLNPRKTVAEIVGLPLKLHGIGNAA 135

Query: 113 IAHR-VDSIAELVGLTKKLDV-HPFDLTPTEKKFCTIGAVIMMDPSVVIFDEPTCGQDAS 170
             +R V  I +LVG+ ++    +P  L+  +++   I   +++ P ++I DEPT   D S
Sbjct: 136 ERNRQVKDILDLVGMPERTHAQYPNQLSGGQRQRVAIARALILRPDILICDEPTSALDVS 195

Query: 171 GNAHLARIIERLKAQ-GRLCITISHDMKFVTANFSHVIVMYHGRVLLDGQTREVFAQ--- 226
             A +  ++  LKA+ G   + ISHD+  V      V VM  G ++      ++F++   
Sbjct: 196 VQAQILNLLLDLKAEFGLTYLFISHDLGVVEHLVDRVAVMNQGSIVELQSREQLFSEPQH 255

Query: 227 --TDTLRRSFVTPPP 239
             T  L  S +TP P
Sbjct: 256 LYTRMLLASALTPDP 270