Pairwise Alignments

Query, 271 a.a., hypothetical protein from Bifidobacterium breve UCC2003

Subject, 345 a.a., methionine ABC transporter ATP-binding protein from Herbaspirillum seropedicae SmR1

 Score =  107 bits (267), Expect = 3e-28
 Identities = 72/228 (31%), Positives = 119/228 (52%), Gaps = 6/228 (2%)

Query: 3   IELQALEHAYPGGDKALDGVDLTLDGNEPVAIIGQNGAGKTTLVKHFNGILRPTGGKVLI 62
           IE+QA+   + G  +A+  VDL++   E   IIG++GAGK+TLV+  N + RPT G++++
Sbjct: 2   IEIQAVTQRF-GNVEAVRKVDLSIRKGEIFGIIGRSGAGKSTLVRTLNLLNRPTSGRIVL 60

Query: 63  NGIDVNERSTA---EWSRSVGYVFQNPDDQLFLESVRKEFEFGPRQIGMGDQDIAHRVDS 119
           +G D+   S A   E  R +G +FQ+  + L   SV           G    +IA +V+ 
Sbjct: 61  DGQDLTSLSAAQLREARRGIGMIFQH-FNLLSSRSVYDNIALPLELAGKSKAEIAAKVEP 119

Query: 120 IAELVGLTKKLDVHPFDLTPTEKKFCTIGAVIMMDPSVVIFDEPTCGQDASGNAHLARII 179
           + ELVGLT   D +P  ++  +K+   I   +  DP V++ DE T   D      +  ++
Sbjct: 120 LLELVGLTALRDRYPAQISGGQKQRVGIARALANDPKVLLSDEATSALDPETTRSILELL 179

Query: 180 ERL-KAQGRLCITISHDMKFVTANFSHVIVMYHGRVLLDGQTREVFAQ 226
            ++ K  G   + I+H M+ +      V VM  G+V+  G+  +VF Q
Sbjct: 180 RKINKELGLTIVLITHQMEVIKQICDRVAVMEAGQVIEQGEVLDVFRQ 227