Pairwise Alignments

Query, 142 a.a., PTS sugar transporter subunit IIA from Bifidobacterium breve UCC2003

Subject, 147 a.a., nitrogen regulatory IIA protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 42.0 bits (97), Expect = 4e-09
 Identities = 30/104 (28%), Positives = 46/104 (44%), Gaps = 3/104 (2%)

Query: 40  ALVEALVAREDLGNTLIATNTAIPHATCPAVTEGAFVYVKLAEPL-LDWSEGAAVDRFVF 98
           A+ E+LVARE +G+T I    AIPH     +T+   + +K  EP+  D  +   VD    
Sbjct: 42  AIFESLVAREKMGSTGIGNGIAIPHGRLTDITQPIAILIKCEEPIAFDAIDKQPVDILFA 101

Query: 99  TVVPEQPSADDGEAVKRFFTSLADDAVLNVFSTGSQESVTQIFQ 142
            +VP          +      L+D  VL        E  T+++Q
Sbjct: 102 LLVPANQCQQHLSTLSCMAEKLSDKQVLKQLRKTHDE--TELYQ 143