Pairwise Alignments

Query, 243 a.a., DNA-binding response regulator from Bifidobacterium breve UCC2003

Subject, 257 a.a., Two component transcriptional regulator TrcR from Mycobacterium tuberculosis H37Rv

 Score =  234 bits (596), Expect = 2e-66
 Identities = 118/235 (50%), Positives = 162/235 (68%), Gaps = 12/235 (5%)

Query: 9   IVVVDDEPSIRELLVASLHFAGFEVNTAASGSEAIEVIEKVQPDLIVLDVMLPDIDGFTV 68
           +++VDDEP++  L+  +LH+ G++V  A  G EAI   +KV PD++VLD+MLPD+DG  +
Sbjct: 34  VLLVDDEPALTNLVKMALHYEGWDVEVAHDGQEAIAKFDKVGPDVLVLDIMLPDVDGLEI 93

Query: 69  TRRIRQEGIDAPVLFLTARDDTQDKIMGLTVGGDDYVTKPFSLEEVVARIRAILRRTRE- 127
            RR+R+  +  P LFLTARD   D++ GLT G DDY+TKPFSLEE+VAR+R +LRR+   
Sbjct: 94  LRRVRESDVYTPTLFLTARDSVMDRVTGLTSGADDYMTKPFSLEELVARLRGLLRRSSHL 153

Query: 128 QVEDDPIIRVADLEINEDSHDVSRAGQPIDLSPTEYKLLRYLMDNEGRVLSKAQILDHVW 187
           +   D  +RV DL ++  S +V+R G PI LS TE++LLR+LM N  R LS+ +ILD VW
Sbjct: 154 ERPADEALRVGDLTLDGASREVTRDGTPISLSSTEFELLRFLMRNPRRALSRTEILDRVW 213

Query: 188 QYDWGGDAAIVESYISYLRKKVDGIEVDDGEGGKRKVTPLIETKRGIGYMIREPK 242
            YD+ G  +IV+ YISYLRKK+D     D E       P+I T RGIGYM+R P+
Sbjct: 214 NYDFAGRTSIVDLYISYLRKKID----SDRE-------PMIHTVRGIGYMLRPPE 257