Pairwise Alignments

Query, 401 a.a., MFS transporter from Bifidobacterium breve UCC2003

Subject, 395 a.a., efflux transmembrane protein from Herbaspirillum seropedicae SmR1

 Score =  191 bits (484), Expect = 4e-53
 Identities = 108/349 (30%), Positives = 191/349 (54%), Gaps = 8/349 (2%)

Query: 22  LIFASFMLGMSEFVVVGILPDIASGLKISEVTVGNLVALFAFVYAPCTPIGSALSARFPR 81
           L  ++F +G +EFV++G+LP++A+ L +S  + G LV  +A       P+ +A + R PR
Sbjct: 8   LTISAFAIGTTEFVIMGLLPEVAANLGVSLSSAGLLVTGYALGVFVGAPLLTATTGRLPR 67

Query: 82  FATYLILMGVFLVGNILCALAPNYPVLLIARLLIASVSGTLVAISMTFAPDVTTDKYRTK 141
               + LM VF+VGN+ CA+AP+Y  L+I R++ +   G    +    A  +   + +  
Sbjct: 68  KTLLVALMVVFVVGNLACAIAPDYTTLMIGRVVASFAHGAFFGVGSVVATSLVPKEKQAS 127

Query: 142 FIAWVFSGFSIASVVGVPIGTWVANTFGWRVTFYLVSVLTAVLMISMALVLPRNSHPAKI 201
            IA +F+G ++A+V+GVP GTW+  ++GWR TF+ V+V+  + + + A+++PR+    + 
Sbjct: 128 AIALMFTGLTVANVLGVPFGTWLGQSYGWRATFWAVTVIGVIALAATAVLVPRSQGGEET 187

Query: 202 GFLRQFRLFFDRRIQLGVLDVVCGAAASYVFYTYLSPIMRDEIGVPEQYLSIGLVIYGCA 261
            F ++ R+    ++ LG+L  V G    +  +TY++PI+ D  G P   +S  L+++G  
Sbjct: 188 DFGKEVRVLMRPQVMLGLLMTVLGFGGVFAAFTYIAPILTDLSGFPASAVSPILLLFGLG 247

Query: 262 CLWSNLYGGKLADKGRGVEPLTHIRPIYCVQAVCLCLLAFASLVPAAGALLLVALGMLMY 321
            +  NL GGKLADK    + +  +     + A  L L         A  + +  +GM  +
Sbjct: 248 LVIGNLAGGKLADK----KLMATLLGSLVLLAAVLVLFGLTVDNKVAAIIGVGLMGMAAF 303

Query: 322 LQNSASQVLYMDVAYQSHPGSVNLAASLNSMSFNIGIAIGSAVGGLVND 370
                 Q+  ++ A     G+ NLA+S N  +FN+G A G+ +GG+  D
Sbjct: 304 ATVPPLQMRVLEKA----TGAPNLASSANIAAFNLGNAAGAWLGGVTID 348