Pairwise Alignments

Query, 1215 a.a., chromosome segregation protein SMC from Bifidobacterium breve UCC2003

Subject, 1205 a.a., Probable chromosome partition protein Smc from Mycobacterium tuberculosis H37Rv

 Score =  723 bits (1867), Expect = 0.0
 Identities = 487/1248 (39%), Positives = 689/1248 (55%), Gaps = 91/1248 (7%)

Query: 1    MYLKELTLRGFKSFASATTLRFEPGITAVVGPNGSGKSNIVDALTWVMGEQGAKNLRGTS 60
            +YLK LTL+GFKSFA+ TTLRFEPGITAVVGPNGSGKSN+VDAL WVMGEQGAK LRG  
Sbjct: 1    VYLKSLTLKGFKSFAAPTTLRFEPGITAVVGPNGSGKSNVVDALAWVMGEQGAKTLRGGK 60

Query: 61   MEDVIFAGTSSRPPLGRAQVSLTIDNSDHTLDIDYTEVTISRTIFRNGGSEYAINGSQCR 120
            MEDVIFAGTSSR PLGRA+V+++IDNSD+ L I+YTEV+I+R +FR+G SEY INGS CR
Sbjct: 61   MEDVIFAGTSSRAPLGRAEVTVSIDNSDNALPIEYTEVSITRRMFRDGASEYEINGSSCR 120

Query: 121  LLDIQELLSDTGLGQQMHVIVGQGRLDAILKADPSGHRAFIEEAAGILKHRKRKERALRK 180
            L+D+QELLSD+G+G++MHVIVGQG+L+ IL++ P   RAFIEEAAG+LKHRKRKE+ALRK
Sbjct: 121  LMDVQELLSDSGIGREMHVIVGQGKLEEILQSRPEDRRAFIEEAAGVLKHRKRKEKALRK 180

Query: 181  LANTESNLNRLDDLLREIHRQLGPLGRQARISRRADAIQVSVRDAQARIYAEDAQRSMAR 240
            L    +NL RL DL  E+ RQL PLGRQA  ++RA AIQ  +RDA+ R+ A+D     A 
Sbjct: 181  LDTMAANLARLTDLTTELRRQLKPLGRQAEAAQRAAAIQADLRDARLRLAADDLVSRRAE 240

Query: 241  RETVRKELGDVRSQLSVAQRELAQVKVRIEQVEALSSESSPAIAKTNQYWHEFSQIRERL 300
            RE V +    +R +   A   LA     +   E+  +E S         W   S + ER+
Sbjct: 241  REAVFQAEAAMRREHDEAAARLAVASEELAAHESAVAELSTRAESIQHTWFGLSALAERV 300

Query: 301  HALAQLAEERGHSLTGQIVSNFGEDPDMLLKRAKELETQAAAQTKAVAD---------AR 351
             A  ++A ER H L  + V+    DP    ++ +ELE  A AQ  AVA+         AR
Sbjct: 301  DATVRIASERAHHLDIEPVAVSDTDP----RKPEELE--AEAQQVAVAEQQLLAELDAAR 354

Query: 352  IALDKATEERADDEKKLASIRQTLTELRKTAQERDAHIASLRELIAREESAVQLAD---- 407
              LD A  E AD E             R+ A+   AH+A++RE   R E   +LA     
Sbjct: 355  ARLDAARAELADRE-------------RRAAEADRAHLAAVREEADRREGLARLAGQVET 401

Query: 408  --SRAKDHTGQRETLAKQHDDAQHQLESLRSEAQSV------ADDDGAALD----KARAA 455
              +R +        L+++ +DA  + +  R+E ++V       D     LD    +  AA
Sbjct: 402  MRARVESIDESVARLSERIEDAAMRAQQTRAEFETVQGRIGELDQGEVGLDEHHERTVAA 461

Query: 456  LAERRDVLNELTDRQRDVQSKIISLQAKADALSDTLDSRNASGSLERDEQVASL-GRLTD 514
            L    + + EL   +R  + ++ SL+A+ DAL+  L  ++ +  L  +   A L G +  
Sbjct: 462  LRLADERVAELQSAERAAERQVASLRARIDALAVGLQRKDGAAWLAHNRSGAGLFGSIAQ 521

Query: 515  FIHVADGWEEAVAHALDQYASAIVVPETGNMLHALERAREDKLGKAV-VLTVMPADE-PF 572
             + V  G+E A+A AL   A A+ V        A+   ++   G+AV VL+  PA + P 
Sbjct: 522  LVKVRSGYEAALAAALGPAADALAVDGLTAAGSAVSALKQADGGRAVLVLSDWPAPQAPQ 581

Query: 573  AALADTDICLANLVTANPEASDKTQA-AACVRTVQLLLADVAAAETADEAQRLVASGKAP 631
            +A  +       L +    A D  ++    V  +  +L+ VA      EA  LV      
Sbjct: 582  SASGEM------LPSGAQWALDLVESPPQLVGAMIAMLSGVAVVNDLTEAMGLVEIRPEL 635

Query: 632  RAVTKHGETFAHGVAAVGGSSISQSDLSLAARRDKA---LAQVKQLGVEAN-ELAEQVSE 687
            RAVT  G+    G  + GGS    S L + +  DKA   LA  + L  + N  LA  ++E
Sbjct: 636  RAVTVDGDLVGAGWVS-GGSDRKLSTLEVTSEIDKARSELAAAEALAAQLNAALAGALTE 694

Query: 688  AKSKRDEAARLVDQESAKRTEVRLKAQQAEKSLKSAEDRVASFARQLEQ-LDKKIADTQE 746
              +++D A + +   +   T +    +Q  +  + A      + R L+Q  +++   TQ 
Sbjct: 695  QSARQDAAEQALAALNESDTAISAMYEQLGRLGQEARAAEEEWNRLLQQRTEQEAVRTQT 754

Query: 747  NRNEHQLKLDDLNRALESAQQSTDEHADFDELDERERTLERDLNLTREHEVAAKIAWTEA 806
              +  QL+   L +A E+ +    +  D        + +    +  R  EV A++A   A
Sbjct: 755  LDDVIQLE-TQLRKAQETQRVQVAQPID-------RQAISAAADRARGVEVEARLAVRTA 806

Query: 807  SRKGESLTRQAGLLRDNAKEAVERRARIESLNERRRDQAAHLQGVADDAREVAAMVERTL 866
              +  ++  +A  LR  A    E R R +     R   AA    VAD  R +A  + R +
Sbjct: 807  EERANAVRGRADSLRRAAAAEREARVRAQQARAARLHAAAVAAAVADCGRLLAGRLHRAV 866

Query: 867  QGVAAERDKLQEAASSHDDELKTLRAQRNEIEPKVTDLTGREHALDVNRERLAAEAGQLM 926
             G +  RD            +  +R + N +  +V +LT   H  ++   + A    QL 
Sbjct: 867  DGASQLRDASAAQRQQRLAAMAAVRDEVNTLSARVGELTDSLHRDELANAQAALRIEQLE 926

Query: 927  QKVSDELGLTLEELVREYGPDQPVPVLDDDGNPVPLEHMDGE-GDGNADDAATDAPDAAA 985
            Q V ++ G+   +L+ EYGP   +P       P  LE  + E      +     AP    
Sbjct: 927  QMVLEQFGMAPADLITEYGPHVALP-------PTELEMAEFEQARERGEQVIAPAP---- 975

Query: 986  NSVTDPSRFQTVPYNRQEQQKRLDKARRDLAALGKINPLATEEFEALEERNKYLNDQRND 1045
                       +P++R  Q++R  +A R LA LG++NPLA EEF ALEER  +L+ Q  D
Sbjct: 976  -----------MPFDRVTQERRAKRAERALAELGRVNPLALEEFAALEERYNFLSTQLED 1024

Query: 1046 VVKSRDDLMQLIKDLDSTMVEVFKSAFDDTAEAFEKMFATLFPGGTGRLRLENPEDLLTT 1105
            V  +R DL+ ++ D+D+ +++VF  AF D    F  +F  LFPGG GRLRL  P+D+LTT
Sbjct: 1025 VKAARKDLLGVVADVDARILQVFNDAFVDVEREFRGVFTALFPGGEGRLRLTEPDDMLTT 1084

Query: 1106 GVLVEASPAGKRVKQLSLLSGGERSLTALALLFAIFTARPSPFYVMDEVEAALDDVNLTR 1165
            G+ VEA P GK++ +LSLLSGGE++LTA+A+L AIF ARPSPFY+MDEVEAALDDVNL R
Sbjct: 1085 GIEVEARPPGKKITRLSLLSGGEKALTAVAMLVAIFRARPSPFYIMDEVEAALDDVNLRR 1144

Query: 1166 LIDAFNELRAHAQLIIITHQQRTMSIADALYGVTMRADGVTAVVSQKL 1213
            L+  F +LR  +Q+IIITHQ+ TM +ADALYGVTM+ DG+TAV+SQ++
Sbjct: 1145 LLSLFEQLREQSQIIIITHQKPTMEVADALYGVTMQNDGITAVISQRM 1192