Pairwise Alignments

Query, 1215 a.a., chromosome segregation protein SMC from Bifidobacterium breve UCC2003

Subject, 1147 a.a., chromosome partition protein Smc from Caulobacter crescentus NA1000

 Score =  310 bits (793), Expect = 6e-88
 Identities = 333/1261 (26%), Positives = 521/1261 (41%), Gaps = 171/1261 (13%)

Query: 1    MYLKELTLRGFKSFASATTLRFEPGITAVVGPNGSGKSNIVDALTWVMGEQGAKNLRGTS 60
            M  + L L GFKSF   T  R EPG+T +VGPNG GKSN+++AL WVMG   AK +R   
Sbjct: 1    MQFQRLRLSGFKSFVEPTEFRIEPGLTGIVGPNGCGKSNLLEALRWVMGANSAKAMRAGG 60

Query: 61   MEDVIFAGTSSRPPLGRAQVSLTIDNSDHTLDIDYTE---VTISRTIFRNGGSEYAINGS 117
            M+DVIFAG+ +RP    A V+LTIDN+D T    + +   + + R I R  GS Y ING 
Sbjct: 61   MDDVIFAGSGARPARNHADVTLTIDNADRTAPAQFNDDPILEVVRRIDRGEGSTYRINGR 120

Query: 118  QCRLLDIQELLSDTGLGQQMHVIVGQGRLDAILKADPSGHRAFIEEAAGILKHRKRKERA 177
            + R  D+Q L +D   G     +V QG++  ++ A P   R  +EEAAG+     R+  A
Sbjct: 121  EVRARDVQLLFADASTGANSPALVRQGQISELIGAKPQNRRRILEEAAGVSGLHTRRHEA 180

Query: 178  LRKLANTESNLNRLDDLLREIHRQLGPLGRQA-------RISRRADAIQVSV-------- 222
              +L   E+NL+RL+D+ RE+   L  L R+A       R+S    A+Q +V        
Sbjct: 181  ELRLRAAETNLSRLEDVARELETALNRLRREARQAEKYKRLSSEIRAVQGAVLYARWTEA 240

Query: 223  RD----------AQARIYAEDAQRSMARRETVRK---ELGDVRSQLSVAQRELAQVKVRI 269
            RD          A AR+  E A+ S A +  + +    +  +R + ++AQ  L Q+ ++ 
Sbjct: 241  RDHLERTTSEATAAARLVEETARASAAAQVAITEAEAAMPPLREEATIAQAILGQLAIQK 300

Query: 270  EQVEALSSESSPAIAKTNQYWHEFSQIRERLHALAQLAEERGHSLTGQIVSNFGEDPDML 329
            ++ E    E+  A A+  +  ++ S+I       AQ  ++   +L    ++   E+   L
Sbjct: 301  DRAE---REAEAAAAEFERLSNDLSRIDADRAREAQAKDDAAAALAR--IAPELEEVRAL 355

Query: 330  LKRAKELETQAAAQTKAVADARIALDKATEERADDEKKLASIRQTLTELRKTAQERDAHI 389
            +  A E   + AA  KA  +AR A + A E+ A                R  A+E     
Sbjct: 356  VAAAPERGPELAAVAKAAEEARAAAEAAVEQLA---------------ARVAAEEAQGRA 400

Query: 390  ASLRELIAREESAVQLADSRAKDHTGQRETLAKQHDDAQHQLESLRSEAQSVADDDGAAL 449
            A+ R  ++  E+     +   +    +R  +  + D A        + A++      AAL
Sbjct: 401  AAAR--LSEAEARANRTNRALEQARAERAAVGPEVDPAAADARQRFANAEAALAAARAAL 458

Query: 450  DKARAALAERRDVLNELTDRQRDVQSKIISLQAKADALSDTLDSRNASGSLERDEQVASL 509
            ++A  A  +  +   +     R V+ ++  L+ +A  L+     R+ SG           
Sbjct: 459  EEAETARVKAAEQEAQARQLARSVEDQLGRLRTEARGLAQLTAPRSKSGH---------- 508

Query: 510  GRLTDFIHVADGWEEAVAHALDQYASAIVVPETGNMLHALERAREDKLGKAVVLTVMPAD 569
                D +    G+  A+A AL     A + P+  +                       A+
Sbjct: 509  APALDSVSPDKGYGAALAAALGDDLDAALDPKAPSYWGG-------------------AE 549

Query: 570  EPFAALADTDICLANLVTANPEASDKTQAAACVRTVQLLLADVAAAETADEAQRLVASGK 629
             P     +    LA LV A P  + +    A           V      D  Q+ +  G 
Sbjct: 550  APAPVWPEGAEPLAPLVKAPPALAARLSHVA-----------VVTRANGDRLQKELKPGM 598

Query: 630  APRAVTKHGETFAHGVAAVGGSSISQSDLSL-AARRDKALAQVKQLGVEANELAEQVSEA 688
              R V+K G+ +           ++++D    AA R +   ++ ++  E + +A +    
Sbjct: 599  --RLVSKDGDLWR------WDGFVARADAPRPAAVRLEQRTRLAEVEAEIDVMAPRAEAT 650

Query: 689  KSKRDEAARLVDQESAKRTEVRLKAQQAEKSLKSAEDRVASFARQ-------LEQLDKKI 741
                  AA  +        + R     AE+ L  A ++VA F R+        + LD  I
Sbjct: 651  TIALKAAADRLRAAEDLLRDKRRGPPDAERLLTQAREQVAKFEREQALRAARAQSLDDTI 710

Query: 742  ADTQENRNEHQLKLDDLNRALESAQQSTDEHADFDELDERERTLERDLNLTREHEVAAKI 801
               +  + E    L +   A  +AQ S D      E  +            RE   AA+ 
Sbjct: 711  GRFEAEKVEADAALGEAREAHAAAQTSGDLQPQLAEARQAAAQ-------AREAAGAART 763

Query: 802  AW-TEASRKGESLTRQAGLLRDNA---KEAVERRARIESLNERRRDQAAHLQGVADDARE 857
            A   E   +     R   L RD A   K A     R ESL   R   AA L+     ARE
Sbjct: 764  ALDVETRERAGRQRRLESLERDRADWSKRAEAAAKRAESLEGDRVKAAAALEA----ARE 819

Query: 858  VAAMVERTLQGVAAERDKLQEAASSHDDELKTLRAQRNEIEPKVTDLTGREHALDVNRER 917
              A ++  L  +  E    +   +   D L+T    R   +         E A    RE+
Sbjct: 820  APAALQEKLVALLDEFAAAEARRAKASDALETAETTRLNADRAA---RAAEQAAGEAREK 876

Query: 918  LAAEAGQL---MQKVSDELGLTLEELVREYGPDQPVPVLDDDGNPVPLEHMDGEGDGNAD 974
             AA    L    Q+ ++     +   +RE    +P    ++ G      H+ GE      
Sbjct: 877  RAALVAHLDGARQRFAE-----VASAIREQARMEP----EELG-----RHVAGEAVAVPK 922

Query: 975  DAATDAPDAAANSVTDPSRFQTVPYNRQEQQKRLDKARRDLAALGKINPLATEEFEALEE 1034
            DAA       A    +  R    P N + +++  + A R                  LE 
Sbjct: 923  DAAGVEAHLFA---LERERDAIGPVNLRAEEEAQEYAGR------------------LET 961

Query: 1035 RNKYLNDQRNDVVKSRDDLMQLIKDLDSTMVEVFKSAFDDTAEAFEKMFATLFPGGTGRL 1094
                  D    V K R  + +L  +    ++  F     +    F+ +F     GG   L
Sbjct: 962  MRSERADLSGAVTKLRAGIEELNAEGRERLLAAFDVINANFQTLFQALFG----GGQAEL 1017

Query: 1095 RLENPEDLLTTGVLVEASPAGKRVKQLSLLSGGERSLTALALLFAIFTARPSPFYVMDEV 1154
            +L   +D L  G+ + A P GKR+  +SL+SGGE++LTA AL+F +F A P+P  V+DEV
Sbjct: 1018 KLIESDDPLEAGLEIFACPPGKRMASMSLMSGGEQALTASALIFGVFLANPAPICVLDEV 1077

Query: 1155 EAALDDVNLTRLIDAFNELRAHAQ--LIIITHQQRTMSIADALYGVTMRADGVTAVVSQK 1212
            +A LDD N+ R  +  +E+R   Q   I ITH   TMS  D L+GVTM   GV+ +VS  
Sbjct: 1078 DAPLDDANVDRYCNMLDEMRRRTQTRFIAITHNPVTMSRMDRLFGVTMAERGVSQLVSVD 1137

Query: 1213 L 1213
            L
Sbjct: 1138 L 1138