Pairwise Alignments

Query, 483 a.a., tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB from Bifidobacterium breve UCC2003

Subject, 446 a.a., (dimethylallyl)adenosine tRNA methylthiotransferase from Herbaspirillum seropedicae SmR1

 Score =  291 bits (745), Expect = 3e-83
 Identities = 161/443 (36%), Positives = 263/443 (59%), Gaps = 19/443 (4%)

Query: 27  KGVFHIHTLGCQMNVHDSERIAGVLE-TDGYVPATEEQVNDHDLDLIVLNTCAVRENAAE 85
           K VF I T GCQMN +DS+++A VL  +DG +     +    + D+I+LNTC++RE A E
Sbjct: 3   KKVF-IKTFGCQMNEYDSDKMADVLNASDGLIKTDRPE----EADVILLNTCSIREKAQE 57

Query: 86  RMYGTVGLWAEMKRQRPNLQIAVGGCMAQLDRQKIANKAPWVAAVFGTKNIGDLPQLLNQ 145
           +++  +G    +K+  P L I VGGC+A  + + I  +AP+V  VFG + +  LPQ++++
Sbjct: 58  KVFSDLGRLRALKKNNPALLIGVGGCVASQEGEAIIKRAPFVDMVFGPQTLHRLPQMISE 117

Query: 146 NRATDTPQVKVD-DQLQQFPSQLPAARASRVSSWVAISVGCNNTCTFCIVPTTRGKEKDR 204
            R +  PQV +   ++++F   LP AR    +++V+I  GC+  C++C+VP TRG+E  R
Sbjct: 118 RRYSGRPQVDISFPEIEKF-DHLPPARVEGATAYVSIMEGCSKYCSYCVVPYTRGEEVSR 176

Query: 205 RPGDILDEVRQCVANGAKEVTLLGQNVNSFGYGI---GDRYAFSKLLRACGTIDGLERVR 261
           R  D+L EV      G KE+ LLGQNVN++  G+   G+   F+ L+     + G+ER+R
Sbjct: 177 RFEDVLTEVAGLADQGVKEIMLLGQNVNAY-RGVMEDGEIADFALLIEYIAELPGIERIR 235

Query: 262 FTSPHPAAFTDDVIEAMAETPNVMHQLHMPLQSGSDKILRSMRRSYRASKFMTILEKVRQ 321
           F + HP  F+  +I+  A+ P + + L++P Q GSD+ L +M+R Y A ++ +++ ++R+
Sbjct: 236 FVTSHPKEFSQRLIDTYAKVPKLCNHLYLPAQHGSDRTLAAMKRGYTALEYKSVIRRMRK 295

Query: 322 AMPDAQISTDIIVGFPGETEEDFQQTLDVVRQARFSSAFTFIYSPRPGTPAAEM-EQVPH 380
             PD  + +D IVGFPGETEEDF+  + +V    F ++F+FI+S RPGTPAA + +  P 
Sbjct: 296 VRPDITVQSDFIVGFPGETEEDFEALMKLVADVGFDNSFSFIFSARPGTPAANLPDDTPQ 355

Query: 381 DVVQDRFNRLVALQEQITAENLQSFEGRDVEVMITGTQGKKDADTHRVTGREKTGVLVHI 440
           +V   R  RL A      A    +  G    V++ G   +++   H + GR ++  +V+ 
Sbjct: 356 EVKLARLQRLQAALNDNAARISAAQVGTVQRVLVEGVSKRRE---HELQGRTESNRVVNF 412

Query: 441 -GVPEGQPMPQIGDFVTATVTHA 462
            G P GQ +  IG  +  ++T A
Sbjct: 413 DGGPNGQRL--IGQIIEVSITEA 433