Pairwise Alignments

Query, 483 a.a., tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB from Bifidobacterium breve UCC2003

Subject, 455 a.a., conserved hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  259 bits (662), Expect = 1e-73
 Identities = 166/459 (36%), Positives = 255/459 (55%), Gaps = 22/459 (4%)

Query: 16  SDEHLTTQERGKGVFHIHTLGCQMNVHDSERIAGVLETDGYVPATEEQVNDHDLDLIVLN 75
           +D    T +  K +F I T GCQMNV DSE IA V++  GY  A   +    + D + +N
Sbjct: 7   ADFKSATADDNKKLF-IETYGCQMNVADSEVIASVMQMAGYSVAETLE----EADAVFMN 61

Query: 76  TCAVRENAAERMYGTVGLWAEMKRQRPNLQIAVGGCMAQLDRQKIANKAPWVAAVFGTKN 135
           TC++R+NA +++   +  +  +K+++  L + V GCMA+  +  +      V  V G   
Sbjct: 62  TCSIRDNAEQKILNRLEFFHSLKKKKKALIVGVLGCMAERVKDDLITNHH-VDLVVGPDA 120

Query: 136 IGDLPQLLNQNRATDTPQVKVDDQLQQFPSQLPAAR--ASRVSSWVAISVGCNNTCTFCI 193
              LP+L+    A +   + VD    +    +  +R   + +S +V+I  GCNN CT+CI
Sbjct: 121 YLTLPELIAAVEAGEKA-INVDLSTTETYRDVIPSRICGNHISGFVSIMRGCNNFCTYCI 179

Query: 194 VPTTRGKEKDRRPGDILDEVRQCVANGAKEVTLLGQNVNSFGYG--IGDRYAFSKLLRAC 251
           VP TRG+E+ R    IL+EV   VA G KEVTLLGQNVNS+ +    G+   F  LLR  
Sbjct: 180 VPYTRGRERSRDVESILNEVADLVAKGYKEVTLLGQNVNSYRFEKPTGEVVTFPMLLRMV 239

Query: 252 GTIDGLERVRFTSPHPAAFTDDVIEAMAETPNVMHQLHMPLQSGSDKILRSMRRSYRASK 311
                  R+RFT+ HP   +D+ +E +A+ PNV   +H+P+QSGS +IL+ M R Y    
Sbjct: 240 AEAAPGVRIRFTTSHPKDMSDETLEVIAQVPNVCKHIHLPVQSGSSRILKLMNRKYTREW 299

Query: 312 FMTILEKVRQAMPDAQISTDIIVGFPGETEEDFQQTLDVVRQARFSSAFTFIYSPRPGTP 371
           ++  +  +++ +PD  ++TDI  GF  ETEED Q +L ++ +  + +AF F YS RPGT 
Sbjct: 300 YLDRVAAIKRIIPDCGLTTDIFSGFHSETEEDHQLSLSLMEECGYDAAFMFKYSERPGTY 359

Query: 372 AAE--MEQVPHDVVQDRFNRLVALQEQITAENLQSFEGRDVEVMITGTQGKKDADTHRVT 429
           A++   + VP DV   R N ++ALQ +++AE+ Q   G+  EV++ G   K+  D  ++ 
Sbjct: 360 ASKHLEDNVPEDVKVRRLNEIIALQNRLSAESNQRCIGKTYEVLVEGV-SKRSRD--QLF 416

Query: 430 GR-EKTGVLVHIGVPEGQPMPQIGDFVTATVTHAGRHNL 467
           GR E+  V+V       +   +IGDFV   VT A    L
Sbjct: 417 GRTEQNRVVVF-----DRGTHRIGDFVNVRVTEASSATL 450