Pairwise Alignments

Query, 330 a.a., ribokinase from Bifidobacterium breve UCC2003

Subject, 303 a.a., ribokinase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  138 bits (347), Expect = 2e-37
 Identities = 95/301 (31%), Positives = 150/301 (49%), Gaps = 7/301 (2%)

Query: 29  VIVIGSMNADYTVTTKRLPKPGETVQGGAMKVMPGGKGANQASAAARLGL---NVQLLGA 85
           ++VIGS NAD+ +  + LP PG+T++  + ++  GGKGANQA A ARL L    V  +  
Sbjct: 4   ILVIGSANADHVMNFEYLPVPGQTLKSRSYRLEHGGKGANQAVACARLCLPDSRVDFICH 63

Query: 86  VGDDANADFLLSKLDEAGVDTADILHVEGPS-GTTVITVSAEGENTIVYSPGANSKAAAG 144
           +G D+  + +     + G+    I  V+  S GT +I V+  GEN I  + GAN+     
Sbjct: 64  LGQDSIGNEMRDSWLKDGIQAEGITLVDNVSTGTAMIFVADNGENAIGIAAGANAHLTPL 123

Query: 145 YVQSHRLTIAGCSVLGLCLESPISTVVAAAQTAHDAGVTVLLNDSPFMDELPHELVEVTD 204
            ++ H    A    L + LE+P  TV  A Q A   G+T +LN +P   +   + ++  D
Sbjct: 124 ELEKHYALFANAQYLLIQLETPTETVSNALQMAKRLGITTVLNPAPAATQ-ELDYLKWVD 182

Query: 205 ILLVNQHEVAQLLGLPDGDVESLDWYEVAERFTDYGFDRAIVTLGASGSVVIENGRWHRV 264
           I+  N+ E   L G+     E  D    A+     G    ++TLG+ G+ +   G    +
Sbjct: 183 IITPNETEAEALTGIEVKHEE--DAKLAAQWLHQQGITTVVITLGSKGAFISSPGFTGLI 240

Query: 265 SAAQVKAVDTTGCGDSFMGTVLAGLAAGYTLLQSAQIGSYVSAYAATKIGAQSAYGTADE 324
            A  V+A+DT   GD+F G ++ GL+ G ++  +    +  SA   T+ GAQ A     E
Sbjct: 241 PALTVQAIDTVAAGDTFNGALVVGLSEGMSIAAAVSFANAASAITVTREGAQRAIPYRSE 300

Query: 325 V 325
           V
Sbjct: 301 V 301