Pairwise Alignments

Query, 285 a.a., carbohydrate ABC transporter permease from Bifidobacterium breve UCC2003

Subject, 272 a.a., ABC transporter for Lactose, permease component 2 (from data) from Sinorhizobium meliloti 1021

 Score =  123 bits (309), Expect = 4e-33
 Identities = 80/261 (30%), Positives = 131/261 (50%), Gaps = 8/261 (3%)

Query: 27  IALLLFLAA-PLLWQISLAFKGPKDDMYAAPYLIPVDPTIQNFVDVFN--RLPLLFYVCN 83
           + L+ FL+  P +W +  A     D +     L+P      N  + F    +PL+F+  N
Sbjct: 17  LGLMAFLSVFPFIWMVLGATNSSIDIIKGK--LLPGAAFATNVANFFTLVNVPLVFW--N 72

Query: 84  TLIVAALNIGGNIISGCFAGYSIALLKFKGKGLVVGLLFLSMLVPGETILISQFLIIRNL 143
           +  +A +     +     AGY   + + + +  V   + L++++P   ++I  F+++   
Sbjct: 73  SAKIAIVATVLTLAVSSLAGYGFEMFRSRRRERVYRAMLLTLMIPFAALMIPLFVMMGKA 132

Query: 144 QLQNNLIGVALPGLVSSMNILLFMNAFKAIPREMIEAAEVDGANVWQRFWRVCVPQVKGT 203
            L N  + V LP + S+  I  F  + KA P E+ +AA+VDG   WQ F  + VP ++ T
Sbjct: 133 GLINTHLAVVLPSIGSAFVIFYFRQSTKAFPSELRDAAKVDGLKEWQIFLFIYVPVMRST 192

Query: 204 MALVGIFSFMGSWNDFLWPLIVLTDDSHYTLTLGMSRLQGTFVSDPRVVAAGTIIALVPI 263
            A   +  FM +WN++LWPLIVL  +   T+TL +S L   +  D  VV  GTI+A +P 
Sbjct: 193 YAAAFVIVFMTAWNNYLWPLIVLQTNETKTITLVISSLASAYYPDYGVVMVGTILATLPT 252

Query: 264 MIFFLVFQRYIFNGLEAGSVK 284
           +  F   QR    G+  GSVK
Sbjct: 253 LAVFFFMQRQFVQGM-LGSVK 272