Pairwise Alignments

Query, 285 a.a., carbohydrate ABC transporter permease from Bifidobacterium breve UCC2003

Subject, 275 a.a., Probable Sn-glycerol-3-phosphate transport integral membrane protein ABC transporter UgpE from Mycobacterium tuberculosis H37Rv

 Score =  145 bits (365), Expect = 1e-39
 Identities = 85/275 (30%), Positives = 152/275 (55%), Gaps = 6/275 (2%)

Query: 15  VTPGKVVRIIVLIALLL---FLAAPLLWQISLAFKGPKDDMYAAPYLI-PVDPTIQNFVD 70
           VTP ++   +   A+LL    +A PLL+    +FK  + D+YA P    P+    QN+  
Sbjct: 1   VTPDRLRSSVGYAAMLLVVTLIAGPLLFVFFTSFKD-QPDIYAQPTSWWPLRWYPQNYRT 59

Query: 71  VFNRLPLLFYVCNTLIVAALNIGGNIISGCFAGYSIALLKFKGKGLVVGLLFLSMLVPGE 130
              ++P   ++ N+LI+ ++        G  + + +  ++F G+  V  ++  +++VP +
Sbjct: 60  ATEQIPFWTFLRNSLIITSVLAVVKFTLGVLSAFGLVFVRFPGRTAVFLVIIAALMVPNQ 119

Query: 131 TILISQFLIIRNLQLQNNLIGVALPGLVSSMNILLFMNAFKAIPREMIEAAEVDGANVWQ 190
             +IS + +I +L L+N   G+ LP    +    L  N F ++P E+IEAA +DGA  WQ
Sbjct: 120 ITVISNYALISHLGLRNTFAGIILPLAGVAFGTFLMRNHFLSLPAEIIEAARMDGARWWQ 179

Query: 191 RFWRVCVPQVKGTMALVGIFSFMGSWNDFLWPLIVLTDDSHYTLTLGMSRL-QGTFVSDP 249
              RV +P  + TM  VG+ + +  WN++LWP ++  D+S   L +G++ L Q   V++ 
Sbjct: 180 LLLRVVLPMSRPTMVAVGVITVVNEWNEYLWPFLMSDDESVAPLPIGLTFLQQAEGVTNW 239

Query: 250 RVVAAGTIIALVPIMIFFLVFQRYIFNGLEAGSVK 284
             V A T++A++PI++ F+  QR +  GL +G+VK
Sbjct: 240 GPVMAVTLLAMLPILLVFIALQRQMIKGLTSGAVK 274