Pairwise Alignments

Query, 285 a.a., carbohydrate ABC transporter permease from Bifidobacterium breve UCC2003

Subject, 274 a.a., Probable sugar-transport integral membrane protein ABC transporter UspB from Mycobacterium tuberculosis H37Rv

 Score =  121 bits (303), Expect = 2e-32
 Identities = 72/277 (25%), Positives = 133/277 (48%), Gaps = 13/277 (4%)

Query: 16  TPGKVVRIIVLIALLL---FLAAPLLWQISLAFKGPKDDMYAAPYLIPVDPTIQNFVDV- 71
           +P +V    V   L +      +P L  +  +F          P  +P  PT+ N+ D+ 
Sbjct: 3   SPSRVSNTAVYAVLTIGAVITLSPFLLGLLTSFTSAHQFATGTPLQLPRPPTLANYADIA 62

Query: 72  ---FNRLPLLFYVCNTLIVAALNIGGNIISGCFAGYSIALLKFKGKGLVVGLLFLSMLVP 128
              F R  ++     T ++ A+ + G +     A Y+ A L+F+G+  +  +   +++VP
Sbjct: 63  DAGFRRAAVV-----TALMTAVILLGQLTFSVLAAYAFARLQFRGRDALFWVYVATLMVP 117

Query: 129 GETILISQFLIIRNLQLQNNLIGVALPGLVSS-MNILLFMNAFKAIPREMIEAAEVDGAN 187
           G   ++  +L++  L L+N    + LP +  S   I L    F+ IP ++I AA +DGAN
Sbjct: 118 GTVTVVPLYLMMAQLGLRNTFWALVLPFMFGSPYAIFLLREHFRLIPDDLINAARLDGAN 177

Query: 188 VWQRFWRVCVPQVKGTMALVGIFSFMGSWNDFLWPLIVLTDDSHYTLTLGMSRLQGTFVS 247
                  V +P  +  +A + + + +  WN+F+WPL++ +      LT+  + LQ  F  
Sbjct: 178 TLDVIVHVVIPSSRPVLAALAMITVVSQWNNFMWPLVITSGHKWRVLTVATADLQSRFND 237

Query: 248 DPRVVAAGTIIALVPIMIFFLVFQRYIFNGLEAGSVK 284
              +V A T +A+VP++  F+ FQR+I   +    +K
Sbjct: 238 QWTLVMAATTVAIVPLIALFVTFQRHIVASIVVSGLK 274