Pairwise Alignments

Query, 285 a.a., carbohydrate ABC transporter permease from Bifidobacterium breve UCC2003

Subject, 277 a.a., ABC transporter, permease protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  134 bits (337), Expect = 2e-36
 Identities = 70/257 (27%), Positives = 130/257 (50%), Gaps = 4/257 (1%)

Query: 29  LLLFLAAPLLWQISLAFKGPKDDMYAAPYLIPVDPTIQNFVDVFNRLPLLFYVCNTLIVA 88
           L +  A PLL+ I  AF       Y+  + +    T++NFV  ++  P   Y  NT+++ 
Sbjct: 24  LAIMWALPLLYAIWTAFH---PSAYSTRFTLNAPLTLENFVTAWHAAPFALYFVNTVLLV 80

Query: 89  ALNIGGNIISGCFAGYSIALLKFKGKGLVVGLLFLSMLVPGETILISQFLIIRNLQLQNN 148
            + +   ++    A Y+ A   F+GK ++  L+ + +++  + +++  +  + ++ + ++
Sbjct: 81  TMVLAAQLVLCTLAAYAFAKYDFRGKNIMFALVLMQLMIMPDVLVVENYRTMASIGVLDS 140

Query: 149 LIGVALPGLVSSMNILLFMNAFKAIPREMIEAAEVDGANVWQRFWRVCVPQVKGTMALVG 208
            + + LP + S+  I L    FK+IP+E+ EAA V+GA+  Q  W+V VP  K       
Sbjct: 141 TLAIGLPYMASAFGIFLLRQTFKSIPKELDEAAAVEGASTLQILWKVYVPLGKPVYLAYA 200

Query: 209 IFSFMGSWNDFLWPLIVLTDDSHYTLTLGMSRLQGTFVS-DPRVVAAGTIIALVPIMIFF 267
           + S    WN+FLWPLIV    +   LT+G+     T    D  ++ A T++   P+++ F
Sbjct: 201 LVSISYHWNNFLWPLIVTNTTNSRPLTVGLQVFSSTEQGVDWAIITAATLMTSGPLLVAF 260

Query: 268 LVFQRYIFNGLEAGSVK 284
           L+FQR          +K
Sbjct: 261 LLFQRQFVQSFMRAGIK 277