Pairwise Alignments

Query, 568 a.a., hypothetical protein from Bifidobacterium breve UCC2003

Subject, 752 a.a., DNA internalization-related competence protein ComEC/Rec2 from Vibrio cholerae E7946 ATCC 55056

 Score = 52.8 bits (125), Expect = 5e-11
 Identities = 115/489 (23%), Positives = 188/489 (38%), Gaps = 78/489 (15%)

Query: 53  WERLLPGGMACLVLILVVLLAHH-LRMRWPGVLAVCIAAACVGSMTTIAADTIVWHDSAM 111
           W  +   G A L LI++VLL +H +  ++ G +A  +     G++  I   + V + +  
Sbjct: 28  WPWMPSWGWAWLCLIVMVLLGYHRVGRQFLGFVAAILTIVLQGNL--IRDQSNVLYQAGP 85

Query: 112 TQARQSSVQSAITATVTAPVVASDQRGYDCQVDVRFSVIVIEGTDRGSVAKARVYADDPY 171
               +  V S  T T  A         Y+  V +      + G     + + R+    P 
Sbjct: 86  DIIIKGRVDSFFTQTRYA---------YEGFVLIH----EVNGQTLNKMTRPRIRLSAPL 132

Query: 172 CARMHRGAAYR-----LVGTLQQARYGRMPLWLLVDGSQPLAQVRDPPLHYALI--SRMQ 224
             + +    +      +VG L Q  +     ++    S     V  P   Y ++  S ++
Sbjct: 133 LLQPNDRVEFSVTLKPIVGRLNQTGFDLEAHYMAQ--SVVARAVVKPDTAYQIVQESGIR 190

Query: 225 QAFFMVIEQL----PDQGRVLVPGLTMGILGQDYVGTDSQSMPIHATYANILEDRFRKSG 280
            + F  +EQL    P QG +L   LT G    +  G D Q                R SG
Sbjct: 191 SSLFFELEQLTHTSPYQGLILA--LTFG----ERKGIDEQEW-----------QALRNSG 233

Query: 281 IMHLMAVSGGHFVLLAGLVRRLGRWM-------LMDRRLTAVMIASMYVLLAAAMFPGDS 333
           ++HL+A+SG H  +   +   LG  M       L    +   ++A +Y  LA    P   
Sbjct: 234 LIHLVAISGLHIGIAFSVGYFLGLGMMRFHAQLLWSPFVCGALLAVLYAWLAGFTLP--- 290

Query: 334 VTRALIMGMMGAASHAMGRRSQALSALCWTVVGVLVVSPGMSTSYGFALSSAAVLGIVLF 393
             RALIM ++  A   +     AL  +  T+V VL+ SP  S S  F +S  AV  IVL+
Sbjct: 291 TQRALIMCLLNVALIMLAFPLSALKRILLTLVAVLLWSPFASLSNSFWMSFLAV-AIVLY 349

Query: 394 --AGRLSRVLGHVLPHSLAEMMAMTIAAQLFTL----PIQVLMEPELPLLSVPANLLVAP 447
             A +  R +               + AQ+F +    P+       L + +V  NL+  P
Sbjct: 350 QLASQSQRQV----------WWKALLWAQVFLVCLMAPVTAYFFGGLSVTAVLYNLVFIP 399

Query: 448 FVGLSTITGLMSLALAWCMPW---LAGVFAWVSSWGTLVMERVAMWLGSNEMATLPWKDG 504
           +  L  +  L  L L   + W    A  + WV  W  L ++    +             G
Sbjct: 400 WFSLVIVPALF-LGLLLMVVWPSVAAAYWPWV-DWTFLPLDWALQFADVGWWVVPSKVQG 457

Query: 505 VVGAALILL 513
           VV A++ +L
Sbjct: 458 VVAASVAIL 466