Pairwise Alignments

Query, 161 a.a., peptide deformylase from Bifidobacterium breve UCC2003

Subject, 197 a.a., Probable polypeptide deformylase Def (PDF) (formylmethionine deformylase) from Mycobacterium tuberculosis H37Rv

 Score =  123 bits (309), Expect = 2e-33
 Identities = 74/177 (41%), Positives = 98/177 (55%), Gaps = 18/177 (10%)

Query: 1   MAIREIRVVPDPVLRTPCDEIK-----EITPAVRRLVDDLLETVDDPGRAGLSANQIGVS 55
           MA+  IR+V DPVL T    +       +   + +L+  + +T+D     GL+ANQIG S
Sbjct: 1   MAVVPIRIVGDPVLHTATTPVTVAADGSLPADLAQLIATMYDTMDAANGVGLAANQIGCS 60

Query: 56  LRAFSYNIDG-------KVGYVLNPVLEEKS------GEQYGDEGCLSVPGLWYKTRRAE 102
           LR F Y+          + G V+NPVLE              DEGCLSVPG  + T RA+
Sbjct: 61  LRLFVYDCAADRAMTARRRGVVINPVLETSEIPETMPDPDTDDEGCLSVPGESFPTGRAK 120

Query: 103 YARVRGIDLDGKEVVLEGTGIMGRMLQHECDHLDGHVYLDRLEKEERRAAMKYMREH 159
           +ARV G+D DG  V +EGTG+  RMLQHE  HLDG +YLDRL     R A + ++ H
Sbjct: 121 WARVTGLDADGSPVSIEGTGLFARMLQHETGHLDGFLYLDRLIGRYARNAKRAVKSH 177