Pairwise Alignments

Query, 321 a.a., RNase adapter RapZ from Bifidobacterium breve UCC2003

Subject, 286 a.a., RNase adaptor protein RapZ from Vibrio cholerae E7946 ATCC 55056

 Score =  181 bits (460), Expect = 1e-50
 Identities = 107/270 (39%), Positives = 156/270 (57%), Gaps = 16/270 (5%)

Query: 35  VLLITGMSGAGRSRAADSVEDMGWYVVDNLPPKLLVPLVDMMTTSGSDSGVHKLAAVIDV 94
           +++++G SGAG+S A   +ED+G+Y VDNLP  LL   +   +  GS   V   A  ID+
Sbjct: 3   LIVVSGQSGAGKSVALRVLEDLGYYCVDNLPVSLLTAFIQ--SVQGSQQNV---AVSIDI 57

Query: 95  RSR----SYFDDLAAVLGHLDDLGVKTRILFLDASNDVLIKRYESVRRPHPL---QHGNR 147
           R+     S   D+   L   +D+ +    LFLDAS + L+KRY   RR HPL   Q    
Sbjct: 58  RNLPKEPSLVQDVLDQLKQNNDVSM----LFLDASKETLLKRYSETRRIHPLSLSQSKPS 113

Query: 148 LIDGILEERHLLENLKERADWVIDTSSLSIHQLSTKLYETMLGSGPTTVAVHIFSFGFKY 207
           L   I  E+ LL  LKE+AD ++D+S+ S+H+LS  +   + G     + +   SFGFKY
Sbjct: 114 LAQAIELEKQLLGPLKEQADLLLDSSNQSLHELSETVRMRIEGRERKDLVMVFQSFGFKY 173

Query: 208 GMPIDADFVADVRFLPNPFWVPSLRELTGADKPVADYVLSSKGAKEFLDSYERAIETAIE 267
           G+P DAD+V DVRFLPNP W P LR LTG D P+  ++       E     ++  E  + 
Sbjct: 174 GLPTDADYVFDVRFLPNPHWEPDLRPLTGLDAPIKSFLEGHSEVMELKQQIQKFFEYWLP 233

Query: 268 GYAQEDKHFVTIAIGCTGGQHRSVAMSEEL 297
              + ++ ++TIAIGCTGG+HRSV ++++L
Sbjct: 234 MLEKNNRSYLTIAIGCTGGKHRSVYLTQQL 263