Pairwise Alignments

Query, 321 a.a., RNase adapter RapZ from Bifidobacterium breve UCC2003

Subject, 283 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  183 bits (465), Expect = 4e-51
 Identities = 106/283 (37%), Positives = 166/283 (58%), Gaps = 8/283 (2%)

Query: 34  EVLLITGMSGAGRSRAADSVEDMGWYVVDNLPPKLLVPLVDMMTTSGSDSGVHKLAAVID 93
           ++++++G SG+G+S A   +ED+G+Y VDNLP +L+ PL+  +  +       K+A  ID
Sbjct: 2   KLVIVSGRSGSGKSVALRVLEDLGYYCVDNLPLQLIGPLLAQLKGNND-----KVAISID 56

Query: 94  VRSRSYFDD-LAAVLGHLDDLGVKTRILFLDASNDVLIKRYESVRRPHPLQHGN-RLIDG 151
           +R+    +  L   L  L + GV+    FL++S+ VL+KRY   RR HPL      L + 
Sbjct: 57  IRNMPEQEKALEKELARLPE-GVELTSFFLNSSDKVLLKRYSETRRLHPLSRSKVSLQEA 115

Query: 152 ILEERHLLENLKERADWVIDTSSLSIHQLSTKLYETMLGSGPTTVAVHIFSFGFKYGMPI 211
           I  E  +L  +    D  IDTS+L++++L+  + + +LG     + +   SFGFK+GMP 
Sbjct: 116 IKLEGKMLAPISNMVDHFIDTSNLNVYELADAVRQILLGRTDKELVIIFESFGFKHGMPT 175

Query: 212 DADFVADVRFLPNPFWVPSLRELTGADKPVADYVLSSKGAKEFLDSYERAIETAIEGYAQ 271
           +ADF+ D RFLPNP W P LR LTG D+PV  ++       +++   E  +ET +    +
Sbjct: 176 EADFMFDARFLPNPHWEPELRPLTGLDEPVKLFLERQVLVNKYIWQIENLLETWLPHLER 235

Query: 272 EDKHFVTIAIGCTGGQHRSVAMSEELARRLRAHGLNVTVSARE 314
            ++ ++TIAIGCTGGQHRSV ++E+LA+R       V    RE
Sbjct: 236 NNRSYLTIAIGCTGGQHRSVYIAEQLAKRFANSHHKVEARHRE 278