Pairwise Alignments

Query, 326 a.a., shikimate 5-dehydrogenase from Bifidobacterium breve UCC2003

Subject, 269 a.a., Probable shikimate 5-dehydrogenase AroE (5-dehydroshikimate reductase) from Mycobacterium tuberculosis H37Rv

 Score =  125 bits (315), Expect = 9e-34
 Identities = 100/289 (34%), Positives = 137/289 (47%), Gaps = 43/289 (14%)

Query: 5   RCAVLGKPIAHSLSPVLHNAAYRSLNLNDWLYDKHEVGEDDLDAFLKGLDSTWAGLSLTM 64
           +  VLG PIAHS SP LH AAYR+L L+DW Y++ E G  +L   + G    W G+S+TM
Sbjct: 7   KAGVLGSPIAHSRSPQLHLAAYRALGLHDWTYERIECGAAELPVVVGGFGPEWVGVSVTM 66

Query: 65  PLKRTIQPYGTPENLWAKELRVANTAVFDWNDITDDPAWPHGKPAIKLYNTDVIGIQLAF 124
           P K     +       A  +  ANT V            PHG  A    NTD+ G+  A 
Sbjct: 67  PGKFAALRFADERTARADLVGSANTLV----------RTPHGWRA---DNTDIDGVAGAL 113

Query: 125 DHINRELGNHYAGDRAGTALIIGNGNTATSALAACCMMPEIG--HITVAARHPGRNAGLK 182
                       G  AG AL++G+G TA +A+     + E+G   ITV AR+  + A L 
Sbjct: 114 ------------GAAAGHALVLGSGGTAPAAVVG---LAELGVTDITVVARNSDKAARLV 158

Query: 183 PVAEKFINTHNPYDEIELSDTSALLNAARTATYVINTIPGLAANGIANVINTDSESHAEP 242
            +  +              D+  L +A   A  +++TIP   A G A  +       A P
Sbjct: 159 DLGTRV----GVATRFCAFDSGGLADAVAAAEVLVSTIPAEVAAGYAGTL------AAIP 208

Query: 243 YSGLLLDVVYNPRPTRLMQAWRAHGGRAIGGEEMLLYQALIQVLLMTGI 291
              +LLD +Y+P PT L  A  + GGR I G +MLL+QA  QV   TG+
Sbjct: 209 ---VLLDAIYDPWPTPLAAAVGSAGGRVISGLQMLLHQAFAQVEQFTGL 254