Pairwise Alignments

Query, 320 a.a., aspartate carbamoyltransferase from Bifidobacterium breve UCC2003

Subject, 339 a.a., aspartate carbamoyltransferase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  207 bits (526), Expect = 4e-58
 Identities = 129/324 (39%), Positives = 181/324 (55%), Gaps = 17/324 (5%)

Query: 5   SVVTLDGLSTNQILDILHKAAYIDGHRKEVAHTCDGRVLATLFYEPSTRTRLSFETAMLR 64
           SV  LD  S   I ++ H+       R++     +G +L  LF+EPSTRTR+SF  A   
Sbjct: 11  SVNQLDLDSIQTIFNVAHRMMPY-ALREKRTKVLEGAILGNLFFEPSTRTRVSFGCAFNL 69

Query: 65  LGGKVIGFAGAQLASVTKGESIADTLKTVSNYVDVVAIRHPKEGAALVASRAASVPVINA 124
           LGG V    G   +S++KGES+ DT + +S Y DV+A+RHP   +    +  + VPVIN 
Sbjct: 70  LGGHVRETTGMASSSLSKGESLYDTARVLSTYSDVIAMRHPDSYSVKEFAEGSRVPVING 129

Query: 125 GDGGHMHPTQTLADLATLQSRFGR----ITDLTVGLCGDLTFGRTVHSLIETLCRFGNVR 180
           GDG + HPTQ L DL T+Q   G     I  + + + GDL FGRTVHSL   LC + N+ 
Sbjct: 130 GDGSNEHPTQALLDLFTIQKELGHASRGIDGMHIAMVGDLKFGRTVHSLSRLLCMYKNIS 189

Query: 181 FVLISPDELKTPQYVIDRI-NATPSCSYVEVRDLASVMGDLDVLYMTRVQKERFFNEDDY 239
           F LISP EL  P YVI  I NA  S    +   L   +   D+LY+TR+Q+ERF ++++ 
Sbjct: 190 FTLISPTELAMPDYVISDIENAGHSIKITD--QLEGHLDKADILYLTRIQEERFPSQEEA 247

Query: 240 LRLRDTYILDEE-KLQLAKPSMAVLHPLPR-----VNEIAVDVDDDPRAAYFEQVKNGML 293
            + R  + L+     Q  K +  ++HPLPR      NE+  D++  P  A F Q  NG+L
Sbjct: 248 NKYRGKFRLNRSIYTQHCKSNTVIMHPLPRDSRAQANELDNDLNSHPNLAIFRQADNGLL 307

Query: 294 VRMALESTVVG--DELPGYE-PLN 314
           +RMAL +  +G   +L  YE P+N
Sbjct: 308 IRMALFALTLGVDSQLEKYECPVN 331