Pairwise Alignments

Query, 356 a.a., tRNA (adenine-N1)-methyltransferase from Bifidobacterium breve UCC2003

Subject, 297 a.a., conserved hypothetical protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  107 bits (267), Expect = 4e-28
 Identities = 81/282 (28%), Positives = 126/282 (44%), Gaps = 39/282 (13%)

Query: 11  GEKVQFTDRKGKKITDQLVAGGSTQTEHGLILHDDVIGRIEGTVILTVHAKREAQVNQVY 70
           G+ V   + +GK+   ++V G       G+I   D+     GT +               
Sbjct: 5   GKLVILINPRGKRYLRRVVEGQDMHGNDGIIAMSDIAAADFGTEV--------------- 49

Query: 71  PEKDRNKPWKSSRAIGGWEYAVMRPRLADYVLSMPRGAQIMYPKDIAQVIQLGDIRSGMR 130
                       R+  G  Y V+ P + D V  + R  Q++YPKDI  +     +  G  
Sbjct: 50  ------------RSTKGVPYRVLEPTIHDLVRGVKRQTQVIYPKDIGYICMRLGVGPGRT 97

Query: 131 VLESGAGSGAMSVNLLDAVGQDGHLTTIELRPEFAKVAQAN---ATLYYGEQPQWWDLKT 187
           ++E+G+GSG++++ L    G  G + T E R EF K+A+ N   A L         D+  
Sbjct: 98  IVEAGSGSGSLTLALSWFAGPTGRIYTHEAREEFMKLARRNLDWAGLGENVTLIHRDIAE 157

Query: 188 GDFDSVAAELPEHWFDRIMLDMLDPWNRLEQAYRVIVPGGVLVSYVTTTTQMSRLAEALR 247
           G FD   A       D + LD+  PW  L+ A + +  G +L   + T  Q+S+L   L 
Sbjct: 158 G-FDVTGA-------DALFLDVRTPWEYLDNAVKAVKSGAMLGFLLPTVAQVSQLLHGLE 209

Query: 248 TAGCWTEPQIQETLERTWKAQGLAVRPDHQMIGHTGFLVVSR 289
             G + E ++ E L R WK     +RP+ +MI HTGFLV +R
Sbjct: 210 -RGPFDEIEVSEILVRRWKPVADRLRPEDRMIAHTGFLVFAR 250