Pairwise Alignments

Query, 546 a.a., ABC transporter substrate-binding protein from Bifidobacterium breve UCC2003

Subject, 543 a.a., oligopeptide ABC transporter substrate-binding protein OppA from Klebsiella michiganensis M5al

 Score =  131 bits (329), Expect = 8e-35
 Identities = 134/522 (25%), Positives = 219/522 (41%), Gaps = 34/522 (6%)

Query: 8   SLVAAGA-AIVMLLSGCGSTGSFSNASSTSGSNIISVYGSEPAHPLFPGAVTEAGGGKVV 66
           SLVAAG  + +M ++   +    +         ++   GSE    L P  +       + 
Sbjct: 8   SLVAAGVLSALMTINAAVAADVPAGVQLADKQTLVRNNGSE-VQSLDPHKIEGVPESNIN 66

Query: 67  DQLFAGLVTYDVKGGIHNEVAESITSSDNATHYVIKIKKGWKFTDGTPVTAHSFVDAWNY 126
             LF GL+  D+ G     VAE   + D    +   ++K  K++DGTPVTA  FV +W  
Sbjct: 67  RDLFEGLLVSDLDGHPVAGVAEKWDNKDFKV-WTFHLRKDAKWSDGTPVTAQDFVYSWQR 125

Query: 127 TANSANKQGSASF--FSTIQGYDDLQKSDVDPSATLSGLKVVDDYTIDVKLNQPDSAFPV 184
            A+       AS+  +  +   DD+        AT  G+K +DD+T +V L++P   F  
Sbjct: 126 LADPKTASPYASYLQYGHLANIDDIIAG--KKPATDLGVKALDDHTFEVTLSEPVPYFYK 183

Query: 185 KSGSHAYMPLPESAFKDPKKFGE------NPVGNGPYKFVSWSHNRSIKMVKNPDYKGNR 238
                +  P+P+SA    +KFG+      N V NG YK   W  N  I + +N +Y  N 
Sbjct: 184 LLVHPSVSPVPKSAI---EKFGDKWTQPANIVSNGAYKLKDWVVNERIVLERNTNYWDNA 240

Query: 239 VAKNDGLDFMIYTSPDSAYADLRGGNLDFTH-AIPSTALKTFQSDKSIKAYNQPGGNTLT 297
               + + F+  +S  +     R G +D T+  +P    +  + +   + +  P   T  
Sbjct: 241 KTVINQVTFLPISSEVTDVNRYRSGEIDMTYNNMPIELFQKLKKEIPKEVHVDPYLCTYY 300

Query: 298 FTIPEWLDHFGQNEEGNLRRQAISMSIDRKTIAEKIFNNTSTPAVDFIAAPISAYSKNLK 357
           + I      F         R A+ M++DR  I  K+ N    PA  +   P       L 
Sbjct: 301 YEINNQKAPFTDVRV----RTALKMALDRDIIVNKVKNQGDLPAYSY--TPPYTDGMKLI 354

Query: 358 GNEVLKYNPKK----AKELWAKANAISPWSGEFGIAYNADGTAKNWVEAICNYIKNTLDI 413
             E  K++ +K    AK+L A+A   +     F + YN     K    A+ +  K  L +
Sbjct: 355 EPEWFKWSQEKRNEEAKKLLAEAGYSADKPLTFNLLYNTSDLHKKLAIAVASIWKKNLGV 414

Query: 414 DAKSIPMSTSDEFLSNVDSGKMTSAYRSGWGPDYPSADNYLVQLYDSSSADGKGGNSGNY 473
           + K +       FL N   G    A R+GW  DY    ++L  +   SS      N+ +Y
Sbjct: 415 NVK-LENQEWKTFLDNRHQGTFDIA-RAGWCADYNEPTSFLNTMLSDSS-----NNTSHY 467

Query: 474 KNPEFDAMMDKALSAPSTEEADKYYQQGEEILLQDLPAIPLW 515
           K+P FD ++ + L      +    Y Q E+ L +D   +P++
Sbjct: 468 KSPAFDKIIAETLKTSDEGKRADLYAQSEQQLDKDSVIVPVF 509