Pairwise Alignments

Query, 892 a.a., alanine--tRNA ligase from Bifidobacterium breve UCC2003

Subject, 879 a.a., alanyl-tRNA synthetase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  535 bits (1379), Expect = e-156
 Identities = 336/893 (37%), Positives = 489/893 (54%), Gaps = 35/893 (3%)

Query: 5   DIAKRYLDYFAKHDHLVMPSASLI-SPNPTTLFTIAGMVPFIPYLLGEQTPPKRRMTSNQ 63
           +I +R+L++F    H ++ S+SL+   +P+ LFT AGMV F    LG++     R T++Q
Sbjct: 6   EIRRRFLEFFQSQGHEIVRSSSLVPKDDPSLLFTNAGMVQFKKIFLGQEKRGYVRATTSQ 65

Query: 64  KCVRT----LDIDEVGKTTRHGTFFQMLGNFSIGDYFKEEAIHYAWELLTTPQDQGGYGF 119
           KC+R      D++ VG+T RH TFF+MLGNFS GDYFKE+AI +AW+ LT          
Sbjct: 66  KCLRVGGKHNDLENVGRTARHHTFFEMLGNFSFGDYFKEDAIKFAWKFLTEDLK-----L 120

Query: 120 DPEKLWVTTFTDDEEARSIW-KNEGFDPEHMQIFGMEDNFWTTGGPGPGGPCSEIYVDRG 178
             E+L+ T F DD+EAR +W  +     E +   G +DNFW+ G  GP GPCSEI +D+G
Sbjct: 121 PKERLYATVFRDDDEARDLWLAHTDIPAERIYRMGEKDNFWSMGDTGPCGPCSEILIDQG 180

Query: 179 PEY--GRDGGPA-ADETRFIEIWDLVFENYEVDNVKSKTDLHIVGELAQKNIDTGAGLER 235
                G D G    D  R++EIW+LVF  Y+     ++T       L + +IDTG GLER
Sbjct: 181 EHMTCGPDCGIGKCDCDRYLEIWNLVFMQYDQAADGTRT------ALPKPSIDTGMGLER 234

Query: 236 LAYLMQGKQNIYETDEVFPVIEAAERLSGRKYGEDEAADVKFRVVADHVRSALMIMSDGV 295
           +A + QG  + ++TD    +I+    ++G  Y  ++  D   RV+ADH RS   +++DG+
Sbjct: 235 IAAVCQGVYSNFDTDLFQAIIQYTCGIAGVSYRANDETDTALRVIADHSRSMAFMITDGI 294

Query: 296 RPSNVGRGYVLRRLLRRTVQAMRVLGVTDPVIPELLPVSKEAMVASYPELNDTFHDVSEA 355
            PSN GRGYVLRRL+RR  +  R++G T   + +      E M   YPEL      ++  
Sbjct: 295 LPSNEGRGYVLRRLIRRAYRFGRLIGQTGTFLHKTALKVVEVMGDDYPELRGNADFMARV 354

Query: 356 AYGEEDAFRRTLENGIEILDVAVKKAKKTADPVVSGSDAFTLHDTYGFPIELTLEMAADQ 415
              EE+ F RTL+ G+ +L+  ++  +      V+G  AF L+DTYGFP+++  ++A  +
Sbjct: 355 VREEEERFNRTLDKGLALLEEELESLRGAGSTRVAGDVAFKLYDTYGFPLDIVNDIAEKR 414

Query: 416 GVKVDEAKFRELMAEQKSRARADALKKRHNVDLSVYDDFKKTLAKPI--DFLGYTDMSAR 473
           G  VDE  FR LMAEQK RA+A A K     D++    F   L + +  +F+GY  +S  
Sbjct: 415 GFTVDEEGFRTLMAEQKERAKA-AWKGSGESDIA--SRFHALLEEGLRSEFIGYDHLSGD 471

Query: 474 AKVIGIMQEGKGSVPAVTGPANVEVILDRTPFYAEAGGQLADQGEILSDDGAVLEVDDVQ 533
           ++V+ ++         +   A   ++  RTPFY  +GGQ  D G I S  G    V D  
Sbjct: 472 SRVVALLDATGLPSEGLPKGAKGYLVATRTPFYGASGGQTGDPGSITSPSGKA-RVLDTL 530

Query: 534 KPIKDLIVHQCRLTEGTLVVGAEVNANIDLARRGAIARSHTATHMVHKALREELGPQATQ 593
           KP  +L VHQ    +G ++   EV+  ++   R A AR+HT TH++H ALR  LG    Q
Sbjct: 531 KPSPELTVHQIETVDGEILPDQEVHLQVEEDERVASARNHTCTHLLHAALRRVLGDHVKQ 590

Query: 594 RGSEDAPNRLRFDFQWSKAPAKSVISAVEERVNDKLRDNLAVTTKEMKFDDAIALGAMHL 653
            GS  AP+RLRFDF    A     I+AVE  VN  +  NL + T  M +D A+  GAM L
Sbjct: 591 AGSLVAPDRLRFDFTHIAAMTPEEIAAVEREVNRVILANLPLETDHMAYDAALTRGAMAL 650

Query: 654 FGEKYGDVVRVVSIGEDGWSRELCGGTHVDHVGKIGMVNILSEASIGSGVRRVDAVVGQG 713
           FGEKYGD VRVV+I ++  S ELCGGTH+   G+ G+  ILSE  + +GVRR++A+ G  
Sbjct: 651 FGEKYGDEVRVVAIADE--SVELCGGTHLRATGQAGLFLILSEGGVAAGVRRIEAITGWN 708

Query: 714 AYDFNAREHALVSQLSDKLNARPDELAERVNTLLAKLKESDRRLASMYEAQLAAAVPALV 773
           A      + A + Q++  L AR  E+  RV  L   +K S R+      +Q  +     +
Sbjct: 709 ALRMVMDQRAELGQVAGLLKARSGEIVPRVEALQKDVK-SLRKDLEKASSQATSGQGRNI 767

Query: 774 EDAKNSAAPVKVAIKNVGHFGAVDALRKTVLDVRGQLGEDAPAVVALAGVNEDDKPMVAV 833
            D       VKV    V     V ALR  + DVR +L    P+ +A     + DK  + V
Sbjct: 768 MDELAEINGVKVLAAKV-EVPNVKALRDLMDDVRSKL----PSGIACLAAPDGDKVSLIV 822

Query: 834 ATNEAARKAGIKAGDLVRGASKILGGGGGGKPDFAQGGGADASKINEALEALK 886
           A ++        A  L++  +  +GG GGG+PD AQ GG + + I+EA + L+
Sbjct: 823 AVSKDLHDR-FTAPALIKAVAAAVGGSGGGRPDMAQAGGTNPAGIDEAFDILR 874