Pairwise Alignments

Query, 217 a.a., DNA-binding response regulator from Bifidobacterium breve UCC2003

Subject, 219 a.a., Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain from Pseudomonas stutzeri RCH2

 Score = 86.7 bits (213), Expect = 3e-22
 Identities = 60/209 (28%), Positives = 108/209 (51%), Gaps = 11/209 (5%)

Query: 1   MRIAIVDDDPIVCQSLETILTATGTADVLWTANDGGAAVQQYFASPANHPDILLIDIQMP 60
           M+I +VDD  +V Q   ++L A      +  A  G  A++Q   S    P ++++D+ +P
Sbjct: 1   MKILLVDDHAVVRQGYASLLKALLPEVTVSEAASGEQALEQVQQSI---PSLVVLDLGLP 57

Query: 61  GKDGLDAAREILPKDPAARILFLTTFADKDYIAQAMALGAKGYLIKQDVAAV-GPALQAV 119
           G  GL+  R +  + P   +L  +   +   + QA+  GA GYL K+    V   A++ V
Sbjct: 58  GISGLETCRRLRQRLPLMPVLIFSMHDELALVRQALDAGASGYLTKRCAPDVLVEAVRKV 117

Query: 120 MAGQVVLGAEILGKLTERTTNPADSSNSGNANDSATKLLNDREREIAMLVAKGLDNRDIA 179
           +AGQ  +   +   L      P+ S   G   +     +  RE EI +++A+G+ NR+IA
Sbjct: 118 LAGQTFIEQPLATDLA--CQRPSHSPAKGRLAE-----MTPREMEIFIMLARGIGNREIA 170

Query: 180 AKLFLSEGTVRNRISVILDKLGLTNRTQL 208
            +L +S  TV N ++++  KLG++++ +L
Sbjct: 171 ERLCISSKTVSNHMALLKSKLGVSSQAEL 199