Pairwise Alignments

Query, 394 a.a., ROK family protein from Bifidobacterium breve UCC2003

Subject, 406 a.a., transcriptional regulator from Klebsiella michiganensis M5al

 Score =  101 bits (252), Expect = 3e-26
 Identities = 85/347 (24%), Positives = 156/347 (44%), Gaps = 37/347 (10%)

Query: 27  IRANNTMAVFNLLFPATHMSRVELKRHIGLSRMAISKVTEEMTDHRIIRETGIDNRTGRG 86
           I+  N  AV+ L+     +SR++L R   L+  +I+K+  EM +  +++ET I     RG
Sbjct: 13  IKQTNAGAVYRLIDQLGPVSRIDLSRFAQLAPASITKIVREMLEAHLVQETEIQEPGSRG 72

Query: 87  KRSTVLAIDTAYWRVIAIDLTQSFVIRGALVDLCGRIVQRVE-----STVETTGAITIDD 141
           + +  L ++T  W  ++I +++   +  AL DL   +V   +       V+      +D 
Sbjct: 73  RPAVGLMVETEAWHYLSIRISRG-ELHLALRDLSSALVVEEQLELALQHVQPFATRLLDH 131

Query: 142 VIALIGRLRSISDLPTLGVGVALPGIVDSEGTVLNAV--HLGWSHLPLRARLEEALGLPV 199
           V     R +   +  T  + V +PGI+D+E  +++ +  +     +PL   L    G+ V
Sbjct: 132 VDQFFIRHQKKLERLT-AIAVTMPGIIDTEHGIIHRMPFYEDVKDMPLGEILANHTGVSV 190

Query: 200 SVNNSTRMALIAERFFG--EGSPNSLLVRIGQGVGAALCVNDEVVDGQAFTAGEIGHITI 257
            + +      +AE  FG   G+ + + V I   VGA +  +  ++   + +  EIGH  +
Sbjct: 191 YIQHDISAWTMAESLFGASRGARDVIQVVIDHNVGAGVITDGRLLHAGSSSLVEIGHTQV 250

Query: 258 DPTGPVCACGRPGCLETFLS------------SSRLHAMIAENP-------QRRTQ---- 294
           DP G  C CG  GCLET  S            +  + +M+ + P       Q   Q    
Sbjct: 251 DPYGKRCYCGNHGCLETIASVESVLELAQIRMAKSMSSMLHQQPLSVEWLCQAALQGDLL 310

Query: 295 ---ILSEAGQTLGRVLAIPAGLLDLDNIAVYGPPEIVSEAFLGSMNE 338
              I+S  G  +GR+LAI   L +   I +  P  + ++    ++++
Sbjct: 311 ARDIISGVGNHVGRILAIMVNLFNPQKILIGSPFNLAADILFPAISD 357