Pairwise Alignments

Query, 394 a.a., ROK family protein from Bifidobacterium breve UCC2003

Subject, 406 a.a., DNA-binding transcriptional dual regulator NagC from Klebsiella michiganensis M5al

 Score =  105 bits (261), Expect = 3e-27
 Identities = 82/332 (24%), Positives = 154/332 (46%), Gaps = 39/332 (11%)

Query: 27  IRANNTMAVFNLLFPATHMSRVELKRHIGLSRMAISKVTEEMTDHRIIRETGIDNRTGRG 86
           ++  N+ AV+ L+     +SR+++     L+  +++K+T ++ +  +I+E      TG G
Sbjct: 15  VKQLNSAAVYRLIDQHGPISRIQIAEQSQLAPASVTKITRQLIERGLIKEVDQQASTG-G 73

Query: 87  KRSTVLAIDTAYWRVIAIDLTQSFVIRGALVDLCGRIVQRV-----ESTVETTGAITIDD 141
           +R+  +  +T  +  I + L + +     L DL  + ++       E T ET     ++ 
Sbjct: 74  RRAISIVAETRSFHAIGVRLGR-YDATLTLYDLSSKTLEEEHYPLPERTQETLEHALLNI 132

Query: 142 VIALIGRL-RSISDLPTLGVGVALPGIVDSEGTVLNAV-HLGWSHLPLRARLEEALGLPV 199
           + A +    R I +L  + + V LPG+VD E  V+  + H+   +  L   LE+   +  
Sbjct: 133 IAAFMESCQRKIREL--IAISVILPGLVDPESGVIRYMPHIQVENWGLVEALEKRFKVTC 190

Query: 200 SVNNSTRMALIAERFFGEGSP--NSLLVRIGQGVGAALCVNDEVVDGQAFTAGEIGHITI 257
            V +  R   +AE +FG      +S+LVR+ +G GA +  N  +  G+    GEIGHI +
Sbjct: 191 YVGHDIRSLALAEHYFGASHDCEDSILVRVHRGTGAGIISNGRIFIGRNGNVGEIGHIQV 250

Query: 258 DPTGPVCACGRPGCLETFLSSS----RLHAMIAENPQRR--------------------- 292
           DP G  C CG  GCLET  +++    R+  ++ +  Q +                     
Sbjct: 251 DPLGERCHCGNFGCLETVAANAAIEHRVRHLLEQGYQSKISLDDCTIKTICKAANKGDAL 310

Query: 293 -TQILSEAGQTLGRVLAIPAGLLDLDNIAVYG 323
             +++   G+ LG+ +AI   L +   + + G
Sbjct: 311 ACEVIEHVGRHLGKTIAIAINLFNPQKVVIAG 342