Pairwise Alignments

Query, 283 a.a., glutamine-binding protein glnH from Bifidobacterium breve UCC2003

Subject, 260 a.a., amino acid ABC transporter substrate-binding protein from Herbaspirillum seropedicae SmR1

 Score =  105 bits (263), Expect = 8e-28
 Identities = 69/238 (28%), Positives = 112/238 (47%), Gaps = 16/238 (6%)

Query: 6   KALAGVLAGVTLISVAACGNGPDPAAGGGSSSQQGQTVEQIKKTGKIRIATFGDLPPYGY 65
           K L G++AG  + S               +S  +   ++ I+K G +R+A   D PP+G 
Sbjct: 5   KLLLGLMAGAMMFS---------------ASVARADALDDIQKHGTLRVAVPADFPPFGS 49

Query: 66  VKNDGTRAGYDVALGNQIGKDLGVKVDWVQVNADGRVDSLKSDKVDLVLANFTVTDERKQ 125
           V  D    G D+ +   I K LGVKV+ + V++  R+  L + KVDLV+++     ER++
Sbjct: 50  VDADLKPQGLDIDVATLIAKKLGVKVELIPVSSANRIPYLTTKKVDLVISSMGKNAEREK 109

Query: 126 VVDFADPYMKVSIGVVSPDSAKITSADQLKGKQLAVTKGTTAEAFFTEKYP-DVQLQKFD 184
           V+DF+  Y     GV  P    + SA  L GK +AVT+G+  +   T+  P    +++++
Sbjct: 110 VIDFSAAYAPFFNGVFGPADLSVKSAADLAGKTIAVTRGSVEDLELTKIVPASATVKRYE 169

Query: 185 SKTQQFQAFKDGRVAALADDNTYLYAWAKDNPGYTVGIKTIGDESTIAPAVKKGNKSL 242
                  +F  G+V  +A  N    A    NP      K +  +S     + KG K L
Sbjct: 170 DNNSTISSFLSGQVQLVATGNVVAAAIIARNPPKKPETKFLIKDSPCFIGLNKGEKKL 227