Pairwise Alignments

Query, 283 a.a., glutamine-binding protein glnH from Bifidobacterium breve UCC2003

Subject, 251 a.a., ABC transporter permease from Herbaspirillum seropedicae SmR1

 Score =  103 bits (258), Expect = 3e-27
 Identities = 63/210 (30%), Positives = 106/210 (50%), Gaps = 4/210 (1%)

Query: 52  IRIATFGDLPPYGYVKNDGTRAGYDVALGNQIGKDLGVKVDWVQVNADGRVDSLKSDKVD 111
           IR+ T    PP  +VK DG R G+DV L   + K +G KV W+ ++  G +  L S++ D
Sbjct: 32  IRVGTDATFPPMEFVK-DGKRTGFDVELIEALAKTMGKKVQWIDIDFKGLIPGLVSNRFD 90

Query: 112 LVLANFTVTDERKQVVDFADPYMKVSIGVV--SPDSAKITSADQLKGKQLAVTKGTTAEA 169
           +  +   +TDER++VV+F+DPY +  + V+    D++     D  KGK+++V  GT +  
Sbjct: 91  IAASAIYMTDERRKVVNFSDPYYRGGLAVLVRRDDNSIKVPEDLNKGKRVSVQVGTKSVG 150

Query: 170 FFTEKYPDVQLQKFDSKTQQFQAFKDGRVAALADDNTYLYAWAKDNPGYTVGIKTIGDES 229
           +  + +P V+  + +     F     GRV A+         +A+  P   V  K +  E 
Sbjct: 151 YLKDNFPGVERVEVEKNQAMFDLLATGRVNAVVTGRPAAVEYARTQPLVRVLDKGLTTE- 209

Query: 230 TIAPAVKKGNKSLLEWTNKEIKTLTSNGFF 259
               A++K +  L    NK ++TL  NG +
Sbjct: 210 LYGFALRKSDTELTAQLNKALQTLRMNGTY 239