Pairwise Alignments

Query, 283 a.a., glutamine-binding protein glnH from Bifidobacterium breve UCC2003

Subject, 269 a.a., amino acid ABC transporter from Herbaspirillum seropedicae SmR1

 Score =  109 bits (273), Expect = 6e-29
 Identities = 73/242 (30%), Positives = 122/242 (50%), Gaps = 7/242 (2%)

Query: 34  GSSSQQGQTVEQIKKTGKIRIATFGDLPPYGYVKNDGTRA-GYDVALGNQIGKDLGVKVD 92
           G+ + Q   ++ I    K+R+A    +PPY  +K+D  R  G DV    ++ KD G++++
Sbjct: 22  GAGAAQADQLDTILAAKKLRVAIDLAVPPYS-MKDDKLRLIGSDVETAQRMAKDFGLELE 80

Query: 93  WVQVNADGRVDSLKSDKVDLVLANFTVTDERKQVVDFADPYMKVSIGVVSPDSAKITSAD 152
            V      RV  L+++K D+V++ F++T ER +V+DF+ PY  + + V +P S KITS  
Sbjct: 81  VVPTTLTNRVPYLQTNKADIVISAFSITPERAKVIDFSVPYAPILVVVGAPRSMKITSPA 140

Query: 153 QLKGKQLAVTKGTTAEAFFTEKYP-DVQLQKFDSKTQQFQAFKDGRVAALADDNTYLYAW 211
            L GK++  T+GTT +   T+  P    + +FD       A   G+    A     L   
Sbjct: 141 DLAGKKIIATRGTTNDQELTKIAPSSATITRFDDDATSMTAMVSGQADIWATSPMLLKVV 200

Query: 212 AKDNPGYTVGIKTIGDESTIAPAVKKGNKSLLEWTNKEIKTLTSNG----FFKDAYQSEL 267
            + NP   +  K     + +A  ++KG   L E  +  I+T  SNG     +K  +++EL
Sbjct: 201 NQKNPSRDIESKLTLKANLLAVGLRKGEPRLKEKIDGWIRTNLSNGELNTIYKKYHEAEL 260

Query: 268 AP 269
            P
Sbjct: 261 PP 262