Pairwise Alignments

Query, 453 a.a., ATP-dependent Clp protease ATP-binding subunit ClpX from Bifidobacterium breve UCC2003

Subject, 417 a.a., ATP-dependent Clp protease, ATP-binding subunit ClpX (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  403 bits (1036), Expect = e-117
 Identities = 223/430 (51%), Positives = 295/430 (68%), Gaps = 32/430 (7%)

Query: 13  RCTFCGKTERQVRKLVAGPNASICDECIALCVDIISEERSKDAEVNSLSLPKPTQIFDYL 72
           RC+FC K + +V++L+AGP   ICDEC+ALC +I++ E + + E     L  P +I   L
Sbjct: 13  RCSFCAKGQDEVKRLIAGPGVYICDECVALCNEIVAHEDAGEREEMDRLLT-PAEIKARL 71

Query: 73  NRYVIGQEEAKRALSVAVYNHYKRVNMELQESAEQLDGANGNAALQSAGRARKSQRANDP 132
           + YVIGQ +AK+ LSVAV+NHYKRV       AE L G                      
Sbjct: 72  DEYVIGQHQAKKILSVAVHNHYKRVFY-----AEALGG---------------------- 104

Query: 133 LSDVEVAKSNILLLGPTGVGKTYLAQSLARVMNVPFVITDATTLTEAGYVGDDVETVLQR 192
             +VE+ KSNILL+GP+G GKT LA++LARV+ VPF I DATTLTEAGYVG+DVE +L +
Sbjct: 105 --EVELEKSNILLIGPSGSGKTLLAKTLARVLKVPFAIADATTLTEAGYVGEDVENILVQ 162

Query: 193 LLQAADGDVSRAQHGIIYIDEIDKIARKSGENTSITRDVSGEGVQQALLKILEGTIASVP 252
           LLQ AD D+  A  GIIYIDEIDKI+RK G+  SITRDVSGEGVQQALLKI+EGT A++P
Sbjct: 163 LLQNADYDIEAAAKGIIYIDEIDKISRK-GDGPSITRDVSGEGVQQALLKIIEGTEANIP 221

Query: 253 LEGTRKHKEQDTVQMDTCGILFICGGAFVGLTDIVRKRLGRRETGFGANWHDA-DLKDEE 311
            +G RKH +Q+ ++MDT  ILFI GGAF+GL  IV +R G    GFGA   +  D    E
Sbjct: 222 PKGGRKHPQQEFIRMDTSNILFILGGAFIGLDKIVDQRSGGGSMGFGAKVSNRKDRPLGE 281

Query: 312 LLKQVNADDLAEFGLLPEFIGRLPVTSVLKELTVDDLTEILTQPANALIKQYRKLFAVDG 371
           LL QV+ +DL +FGL+PEFIGR+PV + + EL  +DL  ILT+P NAL++QY+KLF +D 
Sbjct: 282 LLDQVHPNDLVKFGLIPEFIGRIPVVTHVDELGEEDLIRILTEPKNALVRQYQKLFELDK 341

Query: 372 VDLEFTDQAVQAIADTAIKQGIGARGLRSIIERTLQDTMFQLPSLEDVKQVVVDKASVEG 431
           V L FT  A+++IA  AI++  GARGLR+++E  + D M+ LP+LE VK+ ++++A VE 
Sbjct: 342 VTLRFTANALKSIASQAIERKTGARGLRNVMENVMLDIMYSLPTLEGVKECIINRAVVEK 401

Query: 432 TSAPKLLRET 441
              P L+ +T
Sbjct: 402 GREPVLIYDT 411