Pairwise Alignments

Query, 616 a.a., DNA repair protein RecN from Bifidobacterium breve UCC2003

Subject, 553 a.a., recombination and repair protein (RefSeq) from Shewanella loihica PV-4

 Score =  191 bits (484), Expect = 9e-53
 Identities = 163/625 (26%), Positives = 278/625 (44%), Gaps = 86/625 (13%)

Query: 1   MLEELDIRNLGPIREASIAPARGMTAITGETGAGKSMLLSAIRLVSGDTAESSRVAAGAD 60
           ML +L I N   +R   +    GMT+ITGETGAGKS+ + A+ L  G+ A+++ V  GA 
Sbjct: 1   MLCQLSINNFAIVRFLELDFKSGMTSITGETGAGKSIAIDALGLCLGNRADANTVRPGAS 60

Query: 61  EAWAQAIFALDDDALAADSGNHGQDDSSRDADDGDPAALIGVAAAVTRARDAGVEPEDGE 120
           +A   A FAL+D  LA        +D+  + DD                          E
Sbjct: 61  KAEVSARFALNDIPLA----KRWLEDNDLELDD--------------------------E 90

Query: 121 LFLSRTVPASGRSRAVLGGKSVPRSVLGSIAGELVTIHGQTDQLKIASAARQREFLDRVA 180
             L RT+ + GRSRA + G  VP + + ++  +L+ IHGQ     +  +  Q   LD  A
Sbjct: 91  CILRRTIGSDGRSRAYINGNPVPLNQMRALGQQLIGIHGQHAHHAMLKSEHQLTLLDSYA 150

Query: 181 DDEAELDAYRHAWNELTAMDERLRRLRSQESSARQQADYLRESIDRINRTNPQLGEDE-- 238
           + +  L+A   ++     + + L +L+  +     +   L+  ++ ++     LGE+E  
Sbjct: 151 NHKMLLEACSASYQRFKLIQKELSQLQQSQHERIARKQLLQYQVEELDEF--ALGEEEFD 208

Query: 239 ELKSRRERIENAADIAQGVGAALGALDASQVDADADGASAVDLINHAVTSLRAIRVGGEF 298
           E+++  +++ N   + Q     L  L       D +  +   L+N ++   +      E 
Sbjct: 209 EIEAEHKKLANGTALIQACQRTLYLLQ------DNEEGAIESLLNMSLDQAQ------EL 256

Query: 299 VEQADRLESINADLSDVVFSLTQELGD--------EGSVEDLDQINGRIHELNELTRRWG 350
                 L+ +   L+D +  + +   +        E   E    +  R+ ++  L R+  
Sbjct: 257 EGYDPELKGVGNMLNDALIQVQESSSELQRYLDKLELDPEHFAALEQRLSKIMMLARKHH 316

Query: 351 PTLADVIAWRDKATFNLEDLDASPEKVAELEAERQSLYSAALAAADTLSAARTKAAASLG 410
               D+       +  L +LD+  EK+ E+  + +S   + +A A  LS +R + A  L 
Sbjct: 317 VNAKDLYQHHQALSQELSELDSDEEKLDEIAQQLESCRESFIAHAQKLSQSRQRYAKELD 376

Query: 411 ARVADELSSLAMSGAS--LEVRVTPRELSDGHDNDREAAAGDSAGDTGPLEPYGRDDIAF 468
            +V   +  L+M      ++V+  P  +S                      P G D + F
Sbjct: 377 KQVTRSIHELSMPKGKFIIDVQFNPEMMS----------------------PNGCDTVEF 414

Query: 469 LFTPFEGSAQLPMGKSASGGELSRLMLALELVAADVRGGSDQTFIFDEVDAGVGGKAAVE 528
             T   G    P+ K ASGGELSR+ L ++++ A  +  +  T IFDEVD G+ G  A  
Sbjct: 415 QVTTNPGQPLQPIAKVASGGELSRIGLGIQVITA--KKVATPTLIFDEVDVGISGPTAAV 472

Query: 529 LGKRLARLARNAQVIVVTHLAQVASWADAQFVVSKESQDSGDEAAGVATTVCEVRDDQRV 588
           +GK L  L  + QV+ VTHL QVA        V+K+S     +A    T++  +   QR+
Sbjct: 473 VGKMLRALGESTQVLCVTHLPQVAGNGHQHMFVNKQS-----KAGQTETSMVPLDKGQRI 527

Query: 589 HEIARMLSGSE-SEASLDHARELLK 612
            E+AR+L G   +  +L +A+ELL+
Sbjct: 528 EELARLLGGDVITNNTLANAKELLQ 552