Pairwise Alignments

Query, 407 a.a., flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase from Bifidobacterium breve UCC2003

Subject, 387 a.a., Probable GcpE protein from Mycobacterium tuberculosis H37Rv

 Score =  479 bits (1232), Expect = e-140
 Identities = 243/355 (68%), Positives = 289/355 (81%)

Query: 30  LHPRRKSHRIMVGSVPVGGGAPISVQSMTNTLTANVPATLQQIAELTAAGCDIVRVAVPS 89
           L PRR + ++MVG+V VG   P+SVQSM  T T +V +TLQQIAELTAAGCDIVRVA P 
Sbjct: 15  LAPRRATRQLMVGNVGVGSDHPVSVQSMCTTKTHDVNSTLQQIAELTAAGCDIVRVACPR 74

Query: 90  QDDADALPEICRKSPVPIIADIHFQSKYVFQAIDAGCAAVRVNPGNIRKFNEVGPSICKA 149
           Q+DADAL EI R S +P++ADIHFQ +Y+F AIDAGCAAVRVNPGNI++F+     + KA
Sbjct: 75  QEDADALAEIARHSQIPVVADIHFQPRYIFAAIDAGCAAVRVNPGNIKEFDGRVGEVAKA 134

Query: 150 ATDAGISLRIGVNAGSLDKELYAKYGGPTPEALVASALKEAHMFEDVGFHDFKISVKHHD 209
           A  AGI +RIGVNAGSLDK    KYG  TPEALV SAL EA +FE+ GF D KISVKH+D
Sbjct: 135 AGAAGIPIRIGVNAGSLDKRFMEKYGKATPEALVESALWEASLFEEHGFGDIKISVKHND 194

Query: 210 VITMVETYRLLASKGDWPLHLGVTEAGPAWQGTIKSCLAFGALLAEGIGDTIRVSLSAPP 269
            + MV  Y LLA++ D+PLHLGVTEAGPA+QGTIKS +AFGALL+ GIGDTIRVSLSAPP
Sbjct: 195 PVVMVAAYELLAARCDYPLHLGVTEAGPAFQGTIKSAVAFGALLSRGIGDTIRVSLSAPP 254

Query: 270 VEEVKVGCKLLEYMGLRPRKFDIISCPSCGRAQVDVIQLASAVTEGLKDVTAPIRVAVMG 329
           VEEVKVG ++LE + LRPR  +I+SCPSCGRAQVDV  LA+ VT GL  +  P+RVAVMG
Sbjct: 255 VEEVKVGNQVLESLNLRPRSLEIVSCPSCGRAQVDVYTLANEVTAGLDGLDVPLRVAVMG 314

Query: 330 CIVNGPGEAREADLGVASGNGKGQIFIKGKVIETVPEDQIVDTLLTKAQEIAAQM 384
           C+VNGPGEAREADLGVASGNGKGQIF++G+VI+TVPE QIV+TL+ +A  +AA+M
Sbjct: 315 CVVNGPGEAREADLGVASGNGKGQIFVRGEVIKTVPEAQIVETLIEEAMRLAAEM 369