Pairwise Alignments

Query, 407 a.a., flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase from Bifidobacterium breve UCC2003

Subject, 383 a.a., 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase from Caulobacter crescentus NA1000

 Score =  330 bits (845), Expect = 6e-95
 Identities = 175/355 (49%), Positives = 236/355 (66%), Gaps = 2/355 (0%)

Query: 33  RRKSHRIMVGSVPVGGGAPISVQSMTNTLTANVPATLQQIAELTAAGCDIVRVAVPSQDD 92
           RR+S +I VGSV VGG APISVQSMTNTLT++  ATL+QI +L  AG DIVRV+ P  + 
Sbjct: 16  RRQSRKIRVGSVEVGGDAPISVQSMTNTLTSDAAATLEQIRQLEEAGADIVRVSCPDVES 75

Query: 93  ADALPEICRKSPVPIIADIHFQSKYVFQAIDAGCAAVRVNPGNIRKFNEVGPSICKAATD 152
             A   I R++ VP++ADIHF  K   +A  AG A +R+NPGNI   + V   + +AA D
Sbjct: 76  TAAFKTIAREAKVPLVADIHFHYKRGIEAAQAGAACLRINPGNIGSPDRVR-DVIQAARD 134

Query: 153 AGISLRIGVNAGSLDKELYAKYGGPTPEALVASALKEAHMFEDVGFHDFKISVKHHDVIT 212
            G S+RIGVNAGSL++EL  KYG P P+A+V SAL  A + +D  FH+FKISVK  D   
Sbjct: 135 HGCSMRIGVNAGSLERELLEKYGEPCPDAMVESALNHARILQDHDFHEFKISVKASDPFM 194

Query: 213 MVETYRLLASKGDWPLHLGVTEAGPAWQGTIKSCLAFGALLAEGIGDTIRVSLSAPPVEE 272
            V  Y  LA   D PLHLGVTEAG    GT+KS +  GA+L  GIGDTIRVSL+A PVEE
Sbjct: 195 TVAAYYQLAEAIDCPLHLGVTEAGATRTGTVKSAIGIGAMLWAGIGDTIRVSLAADPVEE 254

Query: 273 VKVGCKLLEYMGLRPRKFDIISCPSCGRAQVDVIQLASAVTEGLKDVTAPIRVAVMGCIV 332
           +KVG  +L+ +GLR R  +II+CPSC R   +VI+   A+ E L  ++ P+ ++++GC+V
Sbjct: 255 IKVGFDILKSLGLRHRGVNIIACPSCARQGFNVIKTVEALEERLAHISTPMSLSIIGCVV 314

Query: 333 NGPGEAREADLGVASGN-GKGQIFIKGKVIETVPEDQIVDTLLTKAQEIAAQMEA 386
           NGPGEA   D+G   G  G G +++ GK       + ++D ++   ++ AA+++A
Sbjct: 315 NGPGEALMTDIGFTGGGAGAGMVYMAGKPDHKQSNEGMIDHIVDLVEKKAAEIQA 369