Pairwise Alignments

Query, 728 a.a., GTP-binding protein from Bifidobacterium breve UCC2003

Subject, 698 a.a., elongation factor G (RefSeq) from Shewanella loihica PV-4

 Score =  227 bits (578), Expect = 2e-63
 Identities = 207/759 (27%), Positives = 314/759 (41%), Gaps = 155/759 (20%)

Query: 7   GIVAHVDAGKTTLSEALLYRTGEIRKLGCVDHGDAFLDTNSLEKARGITI-------FAH 59
           GI AHVDAGKTT +E +L+ TG   K+G V  G A +D    E+ RGITI       F  
Sbjct: 14  GICAHVDAGKTTTTERVLFYTGMSHKIGEVHDGAATMDWMEQEQERGITITSAATTTFWR 73

Query: 60  QALVEHGDLRLTLLDTPGHVDFAAETERVLRVLDYAILVVSGTDGVQGHTETLWRLLARY 119
               +  + R+ ++DTPGHVDF  E ER LRVLD A++V  G+ GV+  +ET+WR   +Y
Sbjct: 74  GMDAQFTEHRINIIDTPGHVDFTIEVERSLRVLDGAVVVFCGSSGVEPQSETVWRQADKY 133

Query: 120 GVPTFIFVNKCDADGFNGEAVLAQLRKRLSDAAYPLPAVDGLSDD--------------- 164
            VP  +FVNK D  G + E V+ Q+R RL     P+    G  ++               
Sbjct: 134 HVPRLVFVNKMDRAGADFERVVGQIRNRLGATCVPIQLNIGAEEEFKGVIDLIKMKAINW 193

Query: 165 -----------DEVP--LGESA--------EDIATLDETAMNDYLEHGGLSVVRLRAMI- 202
                      +E+P  L + A        E  A   E  M+ YLE G LS   ++A + 
Sbjct: 194 NESDQGMTFNYEEIPAELADKAAEMREYLVESAAEASEELMDKYLEEGELSEEEIKAALR 253

Query: 203 ---AARELFPVYFGSALKLEGVEEFLD----------------GVESFTAETQWP----E 239
               A E+     GSA K +GV+  LD                G++    E + P     
Sbjct: 254 QRTLANEIVLATCGSAFKNKGVQAVLDAVIDYLPSPVEVPAIKGIDDNENEVERPADDNA 313

Query: 240 RFAARVFKVAHDGQHNRMTWLRVTGGMLKAKEIVSSSTRKTAEPAWSEKVDQVRVYNGAK 299
            F+A  FK+A D     +T++RV  G+L+A   V +S ++       E++ ++   +   
Sbjct: 314 PFSALAFKIATDPFVGTLTFVRVYSGVLEAGSGVYNSVKQK-----RERIGRMVQMHAND 368

Query: 300 FDTVTEVPAGAVCAVTGLTQTFPGEGLGYEPDAESPSL-------QPVLTYTVLPADAGS 352
              + EV AG + A  GL     G+ L    DA+   +       +PV+T  V P     
Sbjct: 369 RKEIKEVRAGDIAAAIGLKDVTTGDTL---CDADHKVILERMEFPEPVITIAVEPRSQAD 425

Query: 353 GDAENVGRDAAQRNTGQHGVDPDNSDDAQEDSGFVARPRFDDLTLHKVITALRELEDENP 412
            D                                            K+  AL++L  E+P
Sbjct: 426 QD--------------------------------------------KMGIALQKLAAEDP 441

Query: 413 LLHVVWVERLAEVHVQLMGAVQLEIIQQTLHDRFGLDVSFGPGSILYRETITEPIEGIGH 472
              V   E   +  +  MG + L+II   +   F ++ + G   + YRETI   +E  G 
Sbjct: 442 SFRVETNEESGQTLISGMGELHLDIIVDRMRREFSVECNVGKPQVAYRETIRSSVEVEGK 501

Query: 473 FEPLR----HYAEAHILLEPGKPGSGISVASALSENDLDRNWQRLILTHLTEREHLGVLV 528
           F         +    + LEP + G G    + +    + R +   +   + E+   GVL 
Sbjct: 502 FVRQSGGRGQFGHVWLKLEPQEEGFGYEFVNEIVGGVVPREYIPAVDKGIQEQMKNGVLA 561

Query: 529 GAPLTDIKMTLVAGKAHLKHTEGGDFRQAAYRAIRQGLMEARAGVSGRPGSPVEERPDTT 588
           G P+ D+K+TL  G  H   +    F+ AA    ++G +EA          PV       
Sbjct: 562 GFPVLDVKVTLFDGSYHDVDSNEMAFKVAASMGFKKGALEA---------DPV------- 605

Query: 589 GQGNCRLLEPWYRFRLEVPADMIGRAMSDVQRMSGTFDSPSTD-GGYAVIEGEAPVSEMR 647
                 LLEP  +  +  P D +G  + D+ R  G  +      GG  ++    P+SEM 
Sbjct: 606 ------LLEPCMKVEVTTPEDYMGDVVGDLNRRRGMIEGMDDGIGGVKIVRAVVPLSEMF 659

Query: 648 DYAMEVNQYAHGHGRFSATFGGYK--PCHDAEQVIKIAG 684
            YA ++     G   +S  F  Y   P + A+ VI+  G
Sbjct: 660 GYATDLRSATQGRASYSMEFLKYSDAPQNVAKSVIEARG 698