Pairwise Alignments

Query, 728 a.a., GTP-binding protein from Bifidobacterium breve UCC2003

Subject, 698 a.a., translation elongation factor G (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  219 bits (557), Expect = 5e-61
 Identities = 199/740 (26%), Positives = 307/740 (41%), Gaps = 147/740 (19%)

Query: 7   GIVAHVDAGKTTLSEALLYRTGEIRKLGCVDHGDAFLDTNSLEKARGITI-------FAH 59
           GI AHVDAGKTT +E +L+ TG   K+G V  G A  D    E+ RGITI       F  
Sbjct: 14  GICAHVDAGKTTTTERVLFYTGLSHKIGEVHDGAATTDWMVQEQERGITITSAAVTTFWR 73

Query: 60  QALVEHGDLRLTLLDTPGHVDFAAETERVLRVLDYAILVVSGTDGVQGHTETLWRLLARY 119
               +  + R+ ++DTPGHVDF  E ER LRVLD A++V  G  GV+  +ET+WR   +Y
Sbjct: 74  GMDAQFTEHRINIIDTPGHVDFTIEVERSLRVLDGAVVVFCGASGVEPQSETVWRQADKY 133

Query: 120 GVPTFIFVNKCDADGFNGEAVLAQLRKRLSDAAYPLPAVDGLSDD--------------- 164
            VP  +FVNK D  G + E V+ Q+R RL     P+    G  ++               
Sbjct: 134 RVPRIVFVNKMDRAGADFERVVKQIRTRLGATCVPIQLNIGAEENFTGVIDLIKMKAINW 193

Query: 165 -----------DEVP--LGESAEDI--------ATLDETAMNDYLEHGGLSVVRLRAMIA 203
                      + +P  L   AE++        A   +  M+ YLE G LS   ++  + 
Sbjct: 194 NEADQGMTFSYEAIPAHLTAKAEEMHEFLVEAAAEASDELMDKYLEEGTLSEEEIKKALR 253

Query: 204 AR----ELFPVYFGSALKLEGVEEFLD----------------GVESFTAETQWPE---- 239
            R    E+     GSA K +GV+  LD                G++    E + P     
Sbjct: 254 QRTINNEIVLATCGSAFKNKGVQAVLDAVVEFLPAPVDVPPIKGIDDNEQEVERPSDDNA 313

Query: 240 RFAARVFKVAHDGQHNRMTWLRVTGGMLKAKEIVSSSTRKTAEPAWSEKVDQVRVYNGAK 299
            FAA  FK+A D     +T++RV  G+L++   V +S ++       E++ ++   +   
Sbjct: 314 PFAALAFKIATDPFVGTLTFIRVYSGVLESGSGVYNSVKQK-----RERIGRIVQMHAND 368

Query: 300 FDTVTEVPAGAVCAVTGLTQTFPGEGL---GYEPDAESPSL-QPVLTYTVLPADAGSGDA 355
              + EV AG + A  GL +   G+ L    ++   E     +PV+T  V P      D 
Sbjct: 369 RTELKEVRAGDIAAAIGLKEVTTGDTLCDNDHKVILERMEFPEPVITIAVEPKSKADQD- 427

Query: 356 ENVGRDAAQRNTGQHGVDPDNSDDAQEDSGFVARPRFDDLTLHKVITALRELEDENPLLH 415
                                                      K+  AL++L  E+P   
Sbjct: 428 -------------------------------------------KMGIALQKLAAEDPSFR 444

Query: 416 VVWVERLAEVHVQLMGAVQLEIIQQTLHDRFGLDVSFGPGSILYRETITEPIEGIGHFEP 475
           V   E  ++  +  MG + L+II   +   FG++ + G   + YRETI   +E  G F  
Sbjct: 445 VETDEESSQTLISGMGELHLDIIVDRMRREFGVECNVGKPQVAYRETIRGSVEAEGKFVR 504

Query: 476 LR----HYAEAHILLEPGKPGSGISVASALSENDLDRNWQRLILTHLTEREHLGVLVGAP 531
                  +    + LEP + G+G    +A+    + R +   +   + E+   GVL G P
Sbjct: 505 QSGGRGQFGHVWLKLEPNEEGAGYEFINAIVGGVVPREFIPAVDKGIQEQMKNGVLAGFP 564

Query: 532 LTDIKMTLVAGKAHLKHTEGGDFRQAAYRAIRQGLMEARAGVSGRPGSPVEERPDTTGQG 591
           + D+K+TL  G  H   +    F+ A     ++G +EA+         PV          
Sbjct: 565 VLDVKVTLFDGSYHDVDSNEMAFKIAGSMGFKKGALEAK---------PV---------- 605

Query: 592 NCRLLEPWYRFRLEVPADMIGRAMSDVQRMSGTFDSPSTD-GGYAVIEGEAPVSEMRDYA 650
              LLEP  +  +  P + +G  + D+ R  G  +      GG  +I    P+SEM  YA
Sbjct: 606 ---LLEPCMKVEVTTPENYMGDVVGDLNRRRGLIEGMDDGFGGIKIIHAVVPLSEMFGYA 662

Query: 651 MEVNQYAHGHGRFSATFGGY 670
            ++     G   +S  F  Y
Sbjct: 663 TDLRSATQGRASYSMEFLKY 682