Pairwise Alignments

Query, 407 a.a., carbamoyl-phosphate synthase small subunit from Bifidobacterium breve UCC2003

Subject, 376 a.a., Probable carbamoyl-phosphate synthase small chain CarA (carbamoyl-phosphate synthetase glutamine chain) from Mycobacterium tuberculosis H37Rv

 Score =  426 bits (1094), Expect = e-124
 Identities = 225/383 (58%), Positives = 263/383 (68%), Gaps = 17/383 (4%)

Query: 19  AVLVLEDGQVYVGEPYGALGETTGEIVFATGMTGYQETLTDPSYDRQIVVQTFPHIGDTG 78
           AVLVLEDG+V+ G P+GA G+  GE VF+TGM+GYQETLTDPSY RQIVV T P IG+TG
Sbjct: 4   AVLVLEDGRVFTGRPFGATGQALGEAVFSTGMSGYQETLTDPSYHRQIVVATAPQIGNTG 63

Query: 79  VNSEDPES--SRIWVAGYIVRDPSPNVSNWRAEGSLDDDLVKNGIVGLSHIDTRKLVRHL 136
            N ED ES   RIWVAGY VRDPSP  SNWRA G+L+D+L++  IVG++ IDTR +VRHL
Sbjct: 64  WNGEDSESRGERIWVAGYAVRDPSPRASNWRATGTLEDELIRQRIVGIAGIDTRAVVRHL 123

Query: 137 RSAGVMRAGIFSGEALVDAATGKLKTIEQLLEDVKNTPPMQGLSLYDEVSTKETYTIEPC 196
           RS G M+AG+FS  AL + A         L+  V+    M G  L  EVST E Y +EP 
Sbjct: 124 RSRGSMKAGVFSDGALAEPA--------DLIARVRAQQSMLGADLAGEVSTAEPYVVEPD 175

Query: 197 GEYEGKEPLYTVAAVDLGIKGMTPHRMAERGCRVHVVPSTITFAELEALNPDGVFFSNGP 256
           G        +TVAA+DLGIK  TP   A RG R HV+P++ TF ++  LNP GVF SNGP
Sbjct: 176 GPPGVSR--FTVAALDLGIKTNTPRNFARRGIRCHVLPASTTFEQIAELNPHGVFLSNGP 233

Query: 257 GDPEQAGPEIELLRQVLDAGYPFFGICFGNQLLGRALGFGTYKLKFGHRGINQPVKDLTT 316
           GDP  A   + L R+VL AG P FGICFGNQ+LGRALG  TYK+ FGHRGIN PV D  T
Sbjct: 234 GDPATADHVVALTREVLGAGIPLFGICFGNQILGRALGLSTYKMVFGHRGINIPVVDHAT 293

Query: 317 GKVEVTAHNHGFAVDAPIGKQVDAPFENGKYGKVFVSHIDLNDDVVEGLQCVDIPAFSVQ 376
           G+V VTA NHGFA+    G+    PF     G   VSH   ND VVEG++ VD  AFSVQ
Sbjct: 294 GRVAVTAQNHGFALQGEAGQSFATPF-----GPAVVSHTCANDGVVEGVKLVDGRAFSVQ 348

Query: 377 YHPEAAAGPHDAAYLFDRFCELM 399
           YHPEAAAGPHDA YLFD+F ELM
Sbjct: 349 YHPEAAAGPHDAEYLFDQFVELM 371