Pairwise Alignments

Query, 176 a.a., transcription antitermination factor NusB from Bifidobacterium breve UCC2003

Subject, 149 a.a., N utilization substance protein B NusB from Caulobacter crescentus NA1000

 Score = 65.9 bits (159), Expect = 3e-16
 Identities = 39/135 (28%), Positives = 71/135 (52%), Gaps = 9/135 (6%)

Query: 3   RSTARKRALNTLYEADEKGQDILSLLDERIAH------PGAQTPLPD--YAIDIVKGVAE 54
           RS AR  A+  LY+ +  G  + S++ E   H       G Q    D  +  D+ +GV  
Sbjct: 9   RSVARLAAVQALYQMEVSGAGVDSVIREFGEHRFDRDVEGEQLAAADETFFADLARGVVT 68

Query: 55  HRRQIDMTLDDH-STGWKVRRMGVVDRNILRIAAWEILFNDEVPDKVAIDEALALAKTLC 113
           ++ +ID  +    ++GW++ R+    R +LR  A+E+++  +VP +V I+E + +AK+  
Sbjct: 69  NQAKIDQGIVKRLASGWRLERLDATARAVLRAGAFELMYRSDVPTEVVINEYVEIAKSFF 128

Query: 114 DDDSPAFIHGLLSAV 128
           +     FI+G L A+
Sbjct: 129 EGPESGFINGALDAI 143