Pairwise Alignments

Query, 386 a.a., glycosyl transferase from Bifidobacterium breve UCC2003

Subject, 383 a.a., putative glycosyltransferase involved in lipopolysaccharide biosynthesis (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 50.1 bits (118), Expect = 1e-10
 Identities = 46/131 (35%), Positives = 61/131 (46%), Gaps = 20/131 (15%)

Query: 199 PVDPEASAPVPFRV-------------IASGRLASEKDQITLIKAASMSKHAGGIQLIIA 245
           P+  +   PVP RV              + GRL   K    LIKA+   K      ++I 
Sbjct: 168 PIGIDEMKPVPGRVAQIKERYAGKKIIFSLGRLVEYKGYEYLIKASQ--KLNDDYIILIG 225

Query: 246 GTGPLKQYLRFRAGRLLARKAD--IGFHKHADMPDLLRSGDLFVHCSIADIESVSV--IE 301
           G GPL++YL+     L  RK    +GF    D+PD   + DLF   SI   E+  +  IE
Sbjct: 226 GKGPLQEYLQSLIDELGVRKKVKLLGFIDDKDLPDYFGACDLFCLSSIWKTEAFGIVQIE 285

Query: 302 AMACGLVPVIA 312
           AM+CG  PVIA
Sbjct: 286 AMSCG-KPVIA 295