Pairwise Alignments

Query, 700 a.a., DNA primase from Bifidobacterium breve UCC2003

Subject, 643 a.a., DNA primase from Caulobacter crescentus NA1000

 Score =  180 bits (457), Expect = 2e-49
 Identities = 170/591 (28%), Positives = 266/591 (45%), Gaps = 73/591 (12%)

Query: 10  VEKVRAAADLYDIVSATVTLKPSGTGTFVGLCPFHDEKTGSFNVRPSLGVWHCFGCGLGG 69
           +E++++     D+V  TV L+  G   + GL PF  EK+ SF V    G +HCF  G  G
Sbjct: 8   LEELKSRLRPSDVVGKTVKLRRQGR-EYAGLSPFTKEKSPSFFVNDEKGFYHCFSSGKHG 66

Query: 70  DVFKYVEQSENIDFREAVELLADKYHIELHYENSGNGPNRENAGSKRTRLLEACEEAQRF 129
           D+  +++++E + F EAVE LA +  + L   +    P       KR+ L +  E A  +
Sbjct: 67  DIISFLQETERLTFAEAVERLAAEAGMSLPEVD----PRAAREEQKRSSLGDWMELAAAW 122

Query: 130 FVSQILTKEALPARKLLGGRNFSQADCERFGCGYAPQGWDNLVRHLASKGFTQKEIFDAG 189
           F S++       AR  L  R   +++  RF  G+AP     L  +L +KG    ++ DAG
Sbjct: 123 FESELRRPVGQTARAYLEKRGLPESEWSRFRIGFAPNNRTGLKDYLIAKGAKPGDLVDAG 182

Query: 190 --LARQGQRGIYDYFRGRVTWPIRDSTGRTLGFGARKLYEDDQIAAKYINTPDTQLYRKT 247
             +A +     YD FR R+ +PI DS G+ + FG R +  D    AKY+N P+T L+ K 
Sbjct: 183 VLIAPEDGGAPYDRFRDRIIFPIADSRGKVVSFGGRAM--DPAARAKYLNGPETSLFHKG 240

Query: 248 QVLYGIDLAKSAI------VKKRQVVIVEGYTDVMAMHLAGIDTAIATCGTAFGAEHAKI 301
           +VLYG+  A+  +       +K  +V+VEGY DV+A   AG+  A+A  GTA   E    
Sbjct: 241 RVLYGLFEARKILHAGQSGGEKPPMVVVEGYMDVIACQRAGV-PAVAAMGTALTEE---- 295

Query: 302 VRRLIADDSLGAVQLVGPLKIKDQPLSSRIVFTFDGDAAGQKAALHAFGLDSAFL--SQT 359
                        Q+ G  ++   P        FDGD AG++AA  A       L   ++
Sbjct: 296 -------------QMEGLWRLHPTP-----TLCFDGDKAGKRAADRAIDRALPLLKPGRS 337

Query: 360 FV-AVADNNLDPCDLRIERGNEAVRSLIANAKPLYD--FVIDAAIGRFDLTYTPGQVGAM 416
           F+ ++     DP D+  E+G  A+++ +++ KP     F  +  +  FD   TP Q   +
Sbjct: 338 FLFSMPVGGKDPDDVLREQGPAALKAQVSDTKPFVQALFEREKEVEPFD---TPEQRTNL 394

Query: 417 KA-VAPLVAQIRDRSLWDAYARKAAGRIGVDLEVMRREVMAARR-QMHVRDEDAYAPKRR 474
           K  +  L A I D+ L  AY  +   R+         E+ AARR +    D      ++R
Sbjct: 395 KVRLRTLAATIADKDLAHAYKEELLDRLD--------EMRAARRVKADASDAGRALSRQR 446

Query: 475 FDREERRVEPGTNPYANPAARKTLERRDAAEQAYFKIDDAVFIAEQQFMATLIQVPRAID 534
           +D   RR  P   P    A  +  +   A  QA      A+ IA        I+ P+ +D
Sbjct: 447 WDNSPRR--PWGKPRLEGATAEGRQAAAALHQAPRPFSAALLIA-------AIRDPKVVD 497

Query: 535 ---RTMFGQLTIDHFMTSVFRTLFQVIAAAGGLPSDNTPQGLWMHNLTKAG 582
                +  Q   D  + ++   L  +      L +D+   GL    L  AG
Sbjct: 498 DRIEVLMNQGFGDERLDAIAHELVNL-----RLEADHVETGLLRGRLASAG 543