Pairwise Alignments

Query, 639 a.a., DNA helicase RecQ from Bifidobacterium breve UCC2003

Subject, 642 a.a., ATP-dependent DNA helicase RecQ from Azospirillum brasilense Sp245

 Score =  407 bits (1047), Expect = e-118
 Identities = 243/641 (37%), Positives = 355/641 (55%), Gaps = 42/641 (6%)

Query: 7   ALGALKQYFGYDSFRPGQQGIVDALLDGRDVLGVMPTGAGKSVCYQIPAALMPGVTIVIS 66
           AL  L   FGY +FR  Q  I+  ++ G D L +MPTG GKS+CYQ+PA +  GVT+V+S
Sbjct: 23  ALEVLASVFGYSAFRGQQADIIAHVIRGGDALVLMPTGGGKSLCYQVPALVRDGVTVVVS 82

Query: 67  PLISLMRDQVDALNDLGLPAAFVNTTQTPDEQAMVFAQAAAGQLKLLYVAPERLETGRFR 126
           PLI+LMRDQV AL +LG+ AAF+N++    E   V      G++ L+YVAPERL T RF 
Sbjct: 83  PLIALMRDQVTALRELGVRAAFLNSSLDAAEAREVERAMVRGEIDLVYVAPERLVTPRFL 142

Query: 127 DFAARTPISLIAVDEAHCVSQWGQDFRSSYLGIGDFIVGLPKRPPVGAFTATATERVRRD 186
           D   RT ++L A+DEAHCVSQWG DFR  YL +       P  P V A TATA  + R +
Sbjct: 143 DLLDRTKLALFALDEAHCVSQWGHDFRPEYLQLSILHERHPTVPRV-ALTATADAQTRAE 201

Query: 187 IVGLLGLRNPAVTVTGFDRPNLYFDVVKLETKYKAAWVANYVAAHPDESGIIYCATRKTT 246
           I   LGL    V ++ FDRPN+ + VV  +++ +   +A     HP+++GIIYC +R   
Sbjct: 202 IKDKLGLTEARVFLSSFDRPNITYRVVPKKSE-RQQMLAFLRENHPEDAGIIYCMSRAKV 260

Query: 247 EALAATLNQMGHAAVAYHGGMSSDAREAAQHDFITDKVPVVVATNAFGMGIDKSDVRYVI 306
           E  A  LNQ G  A+ YH G+ S+ REA Q  FI  +  V+VAT AFGMGIDK +VR+V 
Sbjct: 261 EDTANWLNQQGREALPYHAGLPSEVREANQDLFIKGEGIVMVATVAFGMGIDKPNVRFVC 320

Query: 307 HHNLPESIEAYYQEAGRAGRDGEPSRCTLLWNESDIVTRRRLLDSDYENERMTPEDQEIV 366
           H + P+S+EAYYQE GRAGRDG P+   + +  +D+V  R++L+          E  +  
Sbjct: 321 HLDPPKSLEAYYQETGRAGRDGLPADAWMSYGMADVVGLRQMLEQS--------EAGDSH 372

Query: 367 RQSKRRLLDGMVGYCRTADCLHRYMTRYFGQEITPTDAPSDTHEGKCGACSNCESTFETI 426
           R+ +R  L+ ++G+C T+ C  + +  YFG          +T E  CG C  C    ET 
Sbjct: 373 RRVERSKLEALLGFCETSACRRKVLLNYFG----------ETLEAPCGNCDTCLEPVETW 422

Query: 427 DVTSVAQAISRCVHDVNQRVGSGKIVKILRGSKAQDLAWLNPEQMPTFGMLKDVNEARVR 486
           D T  AQ     V+   QR G+G ++ +L G+  + +A    + + TFG  K++++A  +
Sbjct: 423 DGTVAAQKALSAVYRTGQRYGAGHLIDVLLGNATEKVAQQAHDALKTFGCGKELSKAEWQ 482

Query: 487 DVLSQMATDGYLFI----------AEGRMPIVMFGARAAETAAS-------DFHYEIKRV 529
            V  Q+   GYL +           +  +P++  G +  +             H  ++R 
Sbjct: 483 SVYRQLVAAGYLTVDLEGYGGFRLTDAGIPVIK-GQQTVKLRKDPVVEKRRGVHDALRRH 541

Query: 530 ERKSASVSSRHGGVASESASASVAMESYIPDDDEEALFQKLRELRRTIAQEIGKPPYIVF 589
             +  S  S  GG++ E  S + A  +  P DD  AL+  L++ R  +A+  G PPY++F
Sbjct: 542 VSRGGSAPS--GGLSGEGVSRAGARGALSPADD--ALWHALKDCRTELARAQGVPPYVIF 597

Query: 590 SDKTLRDMARIKPITNAQFLAVNGVGQHKLDLYGKRFMEAV 630
            D TL +M   +P+  A F  + GVG  KL+ Y   F++ +
Sbjct: 598 HDSTLLEMVATRPMDRAAFARLPGVGARKLERYADPFLDVI 638