Pairwise Alignments

Query, 239 a.a., Crp/Fnr family transcriptional regulator from Bifidobacterium breve UCC2003

Subject, 211 a.a., catabolite gene activator (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 70.1 bits (170), Expect = 3e-17
 Identities = 44/188 (23%), Positives = 93/188 (49%), Gaps = 5/188 (2%)

Query: 42  YDKGDYIFSEGDTDHRMYLLERGRVKLVRTSSDDRVQLLSIHAPGEVLGEIPVFDPNGGP 101
           Y     +   G+    +Y + +G V ++    + +  +LS    G+ +GE+ +F+     
Sbjct: 25  YPAKSTLIHAGEDSDTLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEEQA-E 83

Query: 102 RTASAVAMSHGTCVVWLEHDTLFSWLDEHPRVAIDMLQVMANRQRDNNERISDLVFMDVP 161
           RTA  V       +  + +      +  +P + + +   MA R +  ++++ +L F+DV 
Sbjct: 84  RTAW-VRAKQACEIAEISYKKFKQLIQVNPEILMKLSAQMAYRLQSTSQKVGNLAFLDVA 142

Query: 162 ARLAKTLLNLGSRFGEPVE-QGLKVPHDLTQEELAQLVGSSRETVNKALMDFSNRGWIAR 220
            R+A+TLL+L  +        G+++   +T++E+ Q+VG SRETV + L     +  I  
Sbjct: 143 GRIAQTLLHLAKQPDAMTHPDGMQI--KITRQEIGQIVGCSRETVGRILKMLEEQNLIQA 200

Query: 221 DGRSIIIF 228
            G++I+++
Sbjct: 201 HGKTIVVY 208