Pairwise Alignments

Query, 332 a.a., ABC transporter permease from Bifidobacterium breve UCC2003

Subject, 288 a.a., ABC transporter for L-Fucose, permease component 2 (from data) from Sinorhizobium meliloti 1021

 Score =  119 bits (299), Expect = 7e-32
 Identities = 86/292 (29%), Positives = 156/292 (53%), Gaps = 18/292 (6%)

Query: 50  NVSNPRRSTLMTV--LCAIFA---VYCLFPFVYLVINATKTQADFTSTFGLGFGKSFALW 104
           N S+  R  L+ V  L  +F    V CL P +++V+++ +   +  +   +   ++ +L 
Sbjct: 4   NASHRLRRRLLKVAHLAGLFLAMLVICL-PGLWIVLSSLRPTVEIMAKPPVWIPETLSL- 61

Query: 105 DNIVTVFTY--QGGI-FGRWLVNTLLYVVVGAGGATLLAIMGGYALAKFRFPGRKAVFAV 161
           D    +F+   QGG+    +  N+L+  V     A  + + GGYA A++RF  + A+F  
Sbjct: 62  DAYRAMFSGAGQGGVPVWDYFRNSLIVSVTSTVIALAIGLSGGYAFARYRFKAKSAIFLG 121

Query: 162 IIGSISVPGIALAVPQFLLFAKLGLTNTPWAMIIP--SLISPFGLYLMWIFSEQAVPTEL 219
            + + +VPGIAL++P F+L+A+ G+ +T +++I+   +L  PF ++L+  F  Q VP +L
Sbjct: 122 FMLTRAVPGIALSLPLFMLYARTGIIDTHFSLILTYVALNVPFTIWLIDGFFRQ-VPKDL 180

Query: 220 LEAARVDGASEFRTFWTISLPLLAPGIVTTALFTIVATWNNYFLPLIMLKDADWYPLTIG 279
            EAA++DG + ++ FW +  PL  PGI +  +F  + +WN Y L   + +  +   L +G
Sbjct: 181 AEAAQIDGCTPWQAFWQVEFPLAGPGIASAGIFAFLTSWNEYALASQITRSVNSKTLPVG 240

Query: 280 LNQWKDQASTAGGQAIQNLVITGSLITIIPLVIAFLCLQKYWQSGLAAGAVK 331
           L  +     TA        +   +++ I+P +     +QK+  SGL  GAVK
Sbjct: 241 LLDY-----TAEFTIDWRGMCALAVVMIVPALTLTFIIQKHLVSGLTFGAVK 287