Pairwise Alignments

Query, 332 a.a., ABC transporter permease from Bifidobacterium breve UCC2003

Subject, 274 a.a., Probable sugar-transport integral membrane protein ABC transporter UspB from Mycobacterium tuberculosis H37Rv

 Score =  118 bits (295), Expect = 2e-31
 Identities = 81/286 (28%), Positives = 138/286 (48%), Gaps = 17/286 (5%)

Query: 51  VSNPRR--STLMTVLCAIFAVYCLFPFVYLVINATKTQADFTSTFGLGFGKSFALW--DN 106
           +S+P R  +T +  +  I AV  L PF+  ++ +      FTS      G    L     
Sbjct: 1   MSSPSRVSNTAVYAVLTIGAVITLSPFLLGLLTS------FTSAHQFATGTPLQLPRPPT 54

Query: 107 IVTVFTYQGGIFGRWLVNTLLYVVVGAGGATLLAIMGGYALAKFRFPGRKAVFAVIIGSI 166
           +          F R  V T L   V   G    +++  YA A+ +F GR A+F V + ++
Sbjct: 55  LANYADIADAGFRRAAVVTALMTAVILLGQLTFSVLAAYAFARLQFRGRDALFWVYVATL 114

Query: 167 SVPGIALAVPQFLLFAKLGLTNTPWAMIIPSLI-SPFGLYLMWIFSEQAVPTELLEAARV 225
            VPG    VP +L+ A+LGL NT WA+++P +  SP+ ++L+     + +P +L+ AAR+
Sbjct: 115 MVPGTVTVVPLYLMMAQLGLRNTFWALVLPFMFGSPYAIFLLREHF-RLIPDDLINAARL 173

Query: 226 DGASEFRTFWTISLPLLAPGIVTTALFTIVATWNNYFLPLIMLKDADWYPLTIGLNQWKD 285
           DGA+       + +P   P +   A+ T+V+ WNN+  PL++     W  LT+      D
Sbjct: 174 DGANTLDVIVHVVIPSSRPVLAALAMITVVSQWNNFMWPLVITSGHKWRVLTVAT---AD 230

Query: 286 QASTAGGQAIQNLVITGSLITIIPLVIAFLCLQKYWQSGLAAGAVK 331
             S    Q    LV+  + + I+PL+  F+  Q++  + +    +K
Sbjct: 231 LQSRFNDQ--WTLVMAATTVAIVPLIALFVTFQRHIVASIVVSGLK 274