Pairwise Alignments

Query, 285 a.a., ribonuclease HII from Bifidobacterium breve UCC2003

Subject, 264 a.a., Probable ribonuclease HII protein RnhB (RNase HII) from Mycobacterium tuberculosis H37Rv

 Score = 83.2 bits (204), Expect = 6e-21
 Identities = 79/275 (28%), Positives = 110/275 (40%), Gaps = 85/275 (30%)

Query: 8   LERSLASQDYDLIVGFDEVGRGALAGPVMVGCAAIWARDLKPDADGELAQADGSAASSRV 67
           LE +L       + G DEVGRGA AGP++V         L P     LA  D        
Sbjct: 23  LESALHRGGLGPVAGVDEVGRGACAGPLVVAACV-----LGPGRIASLAALD-------- 69

Query: 68  SGDNGTDAGVITPDPAPYLSVPAGVADSKMLTEHRREAIFDELCSWCAAYAVGQASNAEI 127
                                     DSK L+E  RE +F  +C +  AY V    +AE+
Sbjct: 70  --------------------------DSKKLSEQAREKLFPLICRYAVAYHVVFIPSAEV 103

Query: 128 DEWGITYALGVAALRALNQVERDLGVGSEFGSPREGSCLTATEGKPLPSRRPITIGAILD 187
           D  G+     VA +  + +    L V       R G  L+                   D
Sbjct: 104 DRRGVH----VANIEGMRRAVAGLAV-------RPGYVLS-------------------D 133

Query: 188 GPSDYITKALNTFDAPDVPIPADVTTKVKGDQHCATVATAAVIAKVTRDRLMVSIAQGNP 247
           G           F  P +P+P+     + GD   A +A A+V+AKV+RDR+MV++   +P
Sbjct: 134 G-----------FRVPGLPMPS--LPVIGGDAAAACIAAASVLAKVSRDRVMVALDADHP 180

Query: 248 RYAAYEWDHNKGYGSAAHRAAIAEYGPTPLHRTSW 282
            Y   E   +KGY + AH  A+A  GP P HR S+
Sbjct: 181 GYGFAE---HKGYSTPAHSRALARLGPCPQHRYSF 212