Pairwise Alignments

Query, 285 a.a., ribonuclease HII from Bifidobacterium breve UCC2003

Subject, 211 a.a., ribonuclease HII from Caulobacter crescentus NA1000

 Score = 79.3 bits (194), Expect = 6e-20
 Identities = 69/263 (26%), Positives = 105/263 (39%), Gaps = 87/263 (33%)

Query: 20  IVGFDEVGRGALAGPVMVGCAAIWARDLKPDADGELAQADGSAASSRVSGDNGTDAGVIT 79
           + G DE GRG  AGPV  G                                    A ++ 
Sbjct: 18  VCGVDEAGRGPWAGPVSAG------------------------------------AVILD 41

Query: 80  PDPAPYLSVPAGVADSKMLTEHRREAIFDELCSWCAAYAVGQASNAEIDEWGITYALGVA 139
           PD      +P G+ DSK L+   R A+ +E+     ++ VG AS  EI +  I +A G+A
Sbjct: 42  PD-----RIPKGLNDSKKLSAKARAALEEEIKDVAISWCVGLASIEEIAQLNILHAAGLA 96

Query: 140 ALRALNQVERDLGVGSEFGSPREGSCLTATEGKPLPSRRPITIGAILDGPSDYITKALNT 199
             RA+                 EG  +T                A++DG  +Y  K    
Sbjct: 97  MRRAV-----------------EGLAVTPAF-------------ALVDG--NYAFK---- 120

Query: 200 FDAPDVPIPADVTTKVKGDQHCATVATAAVIAKVTRDRLMVSIAQGNPRYAAYEWDHNKG 259
                  +P  V T +KGD    ++A A+++AK  RDR+M+   + +  Y  Y +  +KG
Sbjct: 121 -------LPCPVKTVIKGDSLSCSIAAASILAKEARDRIMI---EADALYPGYGFAGHKG 170

Query: 260 YGSAAHRAAIAEYGPTPLHRTSW 282
           Y +  H   +   GP+P+HR  W
Sbjct: 171 YHAKVHVEGLRRLGPSPIHRLGW 193