Pairwise Alignments

Query, 549 a.a., cysteine--tRNA ligase from Bifidobacterium breve UCC2003

Subject, 459 a.a., cysteinyl-tRNA synthetase (RefSeq) from Shewanella amazonensis SB2B

 Score =  315 bits (806), Expect = 3e-90
 Identities = 193/520 (37%), Positives = 277/520 (53%), Gaps = 63/520 (12%)

Query: 31  LNLYDTASHQVSHFVPLKPGEVGIYVCGATVQSSPHIGHIRAAVAFDIVRRWFLKLGYKV 90
           L +Y++ S Q   F P++PG++G+YVCG T+    HIGH R  V FD++ R+    GY+V
Sbjct: 2   LKIYNSISRQKEEFKPIQPGKIGMYVCGVTIYDLCHIGHGRTFVCFDMIVRYLRYRGYEV 61

Query: 91  TFVRNVTDIDDKILDKAAAAGQRWWARAYYYEREFTEAYNTLGVLTPTVEPRATGHMSDM 150
            + RN+TD+DDKI+ +A   G+   +       E    ++ L ++ P+ EPRAT H+ ++
Sbjct: 62  NYQRNITDVDDKIIKRANENGESCDSLTERLIGEMHADFDALNMVRPSFEPRATLHIDEI 121

Query: 151 IDLIQRILDNGHGYVVTDADGKPTGNVYFDVASWPHYGELTHQKQTAEVDEAAAVADRMG 210
           ID++ R+LD GH YV  D      G+V FDV+S+  YG L+ Q    ++++  A A    
Sbjct: 122 IDMVTRLLDRGHAYVAAD------GDVLFDVSSYAAYGRLSGQ----DLEQLQAGAR--- 168

Query: 211 PSVDATGDDKYNPVDPADASPDKHDPRDFALWKAPKDTDPEDARWSTPFGVGRPGWHIEC 270
                            +   +K +P DF LWK  K  +P    W +P+G GRPGWHIEC
Sbjct: 169 ----------------VEVDENKRNPMDFVLWKMSKPGEPT---WDSPWGPGRPGWHIEC 209

Query: 271 SAMSHRYLGDGFDIHGGGLDLRFPHHENEMAQTRAA-GYPSAARWMHSAWVTAKGEKMSK 329
           SAM+ ++LG  FDIHGGG DL+FPHHENE+AQ+  A   P    WMH+  V    EKMSK
Sbjct: 210 SAMNSKHLGLHFDIHGGGSDLQFPHHENEIAQSCCAHDTPYVNTWMHTGMVMVDREKMSK 269

Query: 330 SLGTGLSVPSVLAENSAWVVRYALGSVQYRSMLEWSDQALVEAQAAYDRVSNFIERAGVA 389
           SLG   ++  VLA   A  VRY L S  YRS L +S+  L +A+A+       +ER   A
Sbjct: 270 SLGNFFTIRDVLAHYDAQTVRYFLLSGHYRSQLNYSEDNLKQARAS-------LERMYTA 322

Query: 390 LGGQPSREEVTGISADDLPTDFVAAMNDDVNVSGATAAIFTTIRSGNTLLSQLADRADSE 449
           L G     E  G  AD+  + F+AAM+DD N   A + +F  +R  N L           
Sbjct: 323 LKGLDLTVEAAG--ADEFVSRFMAAMDDDFNTPEAYSVLFDMVREINRL---------KT 371

Query: 450 AVQAEVRETLLAVRAMLDTLGLDPLAEPWVSAGAAGGASDGTTETPEHAALEALITEQLN 509
           +  A   +  +A++ + + LG        + +        G     E A +EALI E+  
Sbjct: 372 SDMAAASQLGVALKELAEVLG--------ILSSTPEAFLQGEGNADEVAEIEALIVERNR 423

Query: 510 ARAEARKARDFAKADQIRDTLAEAGITIEDGLQGSTWSLK 549
           ARAE    +D+  AD  RD L   G+ +EDG +G+TW  K
Sbjct: 424 ARAE----KDWPAADVARDRLNALGVVLEDGPEGTTWRKK 459