Pairwise Alignments

Query, 549 a.a., cysteine--tRNA ligase from Bifidobacterium breve UCC2003

Subject, 485 a.a., cysteinyl-tRNA synthetase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  294 bits (752), Expect = 6e-84
 Identities = 198/536 (36%), Positives = 278/536 (51%), Gaps = 70/536 (13%)

Query: 31  LNLYDTASHQVSHFVPLKPGEVGIYVCGATVQSSPHIGHIRAAVAFDIVRRWFLKLGYKV 90
           + LY+T + +  HF P  PG+V +YVCG T     HIGH R+AV FD++ R+    G  V
Sbjct: 1   MQLYNTLTRKKEHFEPAVPGKVNMYVCGITAYDLCHIGHARSAVVFDVLVRYLRHTGLDV 60

Query: 91  TFVRNVTDIDDKILDKAAAAGQRWWARAYYYEREFTEAYNTLGVLTPTVEPRATGHMSDM 150
           TF RN TD+DDKI+ +A   G      A  Y   F E  + L VL   +EPRAT H+ +M
Sbjct: 61  TFARNFTDVDDKIITRANQEGLTSQEVAEKYIATFYEDMDRLNVLRADLEPRATTHIEEM 120

Query: 151 IDLIQRILDNGHGYVVTDADGKPTGNVYFDVASWPHYGELTHQKQTAEVDEAAAVADRMG 210
           I L  R+++    Y        P+G+VYF V ++P YG+L+ +    +VD+  + A R+ 
Sbjct: 121 ISLCVRLIEQDKAYAT------PSGDVYFRVRAFPGYGKLSGR----DVDDLRSGA-RVA 169

Query: 211 PSVDATGDDKYNPVDPADASPDKHDPRDFALWKAPKDTDPEDARWSTPFGVGRPGWHIEC 270
           P                    +K DP DFALWKA K   P +  W +P+G GRPGWHIEC
Sbjct: 170 P------------------GEEKEDPLDFALWKAAK---PGEPFWESPWGNGRPGWHIEC 208

Query: 271 SAMSHRYLGDGFDIHGGGLDLRFPHHENEMAQTRAA-GYPSAARWMHSAWVTAKGEKMSK 329
           SAMS ++L    DIHGGG DL FPHHENE+AQT AA G      W+H+ +V    EKMSK
Sbjct: 209 SAMSEKHLPLPLDIHGGGQDLVFPHHENEIAQTEAALGKDFVRYWVHNGFVQVNAEKMSK 268

Query: 330 SLGTGLSVPSVLAENSAWVVRYALGSVQYRSMLEWSDQALVEAQAAYDRVSNFIERAGVA 389
           SLG   ++  +L       +RY L +  YRS ++++ +++ EA+    R+    E  G+ 
Sbjct: 269 SLGNFRTIRDILENYLPETLRYFLLTKHYRSPIDFTFESMDEAEKNLKRI---YEALGL- 324

Query: 390 LGGQPSREEVTGISADDLPTD-----------FVAAMNDDVNVSGATAAIFTTIRSGNTL 438
           L  +  RE+ T   +  LP D           F  AM DD+N + A   +FT +R  N +
Sbjct: 325 LHAELEREKWT---SGPLPKDVTEEFEGLRQAFADAMEDDMNTAAALGHVFTMVRLANRI 381

Query: 439 LSQLADRADSEAVQAEVRETLLAVR---AMLDTLGLDP---LAEPWVSAGAAGGASDGTT 492
           L     R  +E  +A  R  L       A+L   G +P   LAE      A  G      
Sbjct: 382 LDNKGQR-KTEGARAFFRAVLDEAATWFAVLGVFGREPAGFLAELRACRVARKGI----- 435

Query: 493 ETPEHAALEALITEQLNARAEARKARDFAKADQIRDTLAEAGITIEDGLQGSTWSL 548
              + A +E L+  ++NARA+    +DFA+AD IRD +A  GI + D   G+ W +
Sbjct: 436 ---DPAKVEELLQARINARAD----KDFARADAIRDEIAALGIEVRDTPSGAVWDV 484