Pairwise Alignments

Query, 549 a.a., cysteine--tRNA ligase from Bifidobacterium breve UCC2003

Subject, 461 a.a., cysteinyl-tRNA synthetase (RefSeq) from Shewanella sp. ANA-3

 Score =  313 bits (803), Expect = 7e-90
 Identities = 198/520 (38%), Positives = 278/520 (53%), Gaps = 63/520 (12%)

Query: 31  LNLYDTASHQVSHFVPLKPGEVGIYVCGATVQSSPHIGHIRAAVAFDIVRRWFLKLGYKV 90
           L +Y++ + Q   F P+ PG+VG+YVCG TV    HIGH R  V+FD++ R+    GY+V
Sbjct: 4   LKIYNSITRQKQEFKPITPGKVGMYVCGVTVYDLCHIGHGRTFVSFDMIVRYLRYAGYEV 63

Query: 91  TFVRNVTDIDDKILDKAAAAGQRWWARAYYYEREFTEAYNTLGVLTPTVEPRATGHMSDM 150
            F RN+TDIDDKI+ +A    +           E  + ++ L ++ P  EPRAT H++++
Sbjct: 64  NFQRNITDIDDKIIKRANENQEDCNTLTDRLIGEMHKDFDALNMIRPDFEPRATLHIAEI 123

Query: 151 IDLIQRILDNGHGYVVTDADGKPTGNVYFDVASWPHYGELTHQKQTAEVDEAAAVADRMG 210
           ID+++R+L  GH YV  D      G+V F VAS+P YG L+ Q    ++   A V     
Sbjct: 124 IDMVERLLARGHAYVAAD------GDVLFSVASFPEYGRLSGQN-LEQLQAGARV----- 171

Query: 211 PSVDATGDDKYNPVDPADASPDKHDPRDFALWKAPKDTDPEDARWSTPFGVGRPGWHIEC 270
                            +   +K +P DF LWK  K  +P    W +P+G GRPGWHIEC
Sbjct: 172 -----------------EVDDNKQNPMDFVLWKMSKPGEPT---WESPWGPGRPGWHIEC 211

Query: 271 SAMSHRYLGDGFDIHGGGLDLRFPHHENEMAQTRAA-GYPSAARWMHSAWVTAKGEKMSK 329
           SAM+ ++LG  FDIHGGG DL+FPHHENE+AQ+  A   P    WMH+  V    EKMSK
Sbjct: 212 SAMNSKHLGLHFDIHGGGSDLQFPHHENEIAQSCCAHDTPYVNYWMHTGMVMVDREKMSK 271

Query: 330 SLGTGLSVPSVLAENSAWVVRYALGSVQYRSMLEWSDQALVEAQAAYDRVSNFIERAGVA 389
           SLG   ++  VL    A  VRY L S  YRS + +S++ L +A+AA +R+   I+   + 
Sbjct: 272 SLGNFFTIRDVLGHYDAETVRYFLLSGHYRSQINYSEENLKQARAALERLYTAIKDVDLT 331

Query: 390 LGGQPSREEVTGISADDLPTDFVAAMNDDVNVSGATAAIFTTIRSGNTLLSQLADRADSE 449
                    VT   A++    F AAM+DD N   A + +F  +R  N L  +  D A + 
Sbjct: 332 ---------VTAAPAEEFVAKFKAAMDDDFNTPEAYSVLFDMVREINRL--KTTDMAQAS 380

Query: 450 AVQAEVRETLLAVRAMLDTLGLDPLAEPWVSAGAAGGASDGTTETPEHAALEALITEQLN 509
           A+        +A++ + D LGL   A     A   G  SD      E A +EALI E+  
Sbjct: 381 AM-------AVAMKQLADVLGLLHQAP---DAFFKGEGSD-----DEVAEIEALIVERNR 425

Query: 510 ARAEARKARDFAKADQIRDTLAEAGITIEDGLQGSTWSLK 549
           ARAE    +D+  AD  R+ L E G+ +EDG  G+TW  K
Sbjct: 426 ARAE----KDWPAADVARNRLNELGVVLEDGPSGTTWRKK 461