Pairwise Alignments

Query, 303 a.a., sugar ABC transporter permease from Bifidobacterium breve UCC2003

Subject, 298 a.a., ABC transporter for Lactose, permease component 1 (from data) from Sinorhizobium meliloti 1021

 Score =  116 bits (290), Expect = 7e-31
 Identities = 82/286 (28%), Positives = 146/286 (51%), Gaps = 7/286 (2%)

Query: 22  GMLYCLPYVVVFLMGTILPILYALYLSFFKERMVGGSRFVGLKNFVRAVSDAKLWESFGR 81
           G L+  P + +  +  + PI ++L++SF   R +   +F G  N VR  +D    ++   
Sbjct: 16  GWLFVAPALGLITLFMVYPIAWSLWMSFQSGRGMT-LKFAGFANIVRLWNDPVFIKALTN 74

Query: 82  VSLYFLIQVPLMLALALLAALILDSGRIRHIAIPRMLLFLPYAVPGVIAALMWGYIYGQR 141
              YF++QVP+M+ LAL+ A +L++ R+    + R  +FLP     V  ++++  ++   
Sbjct: 75  TMTYFVVQVPIMILLALILASLLNNPRLVGRGVFRTAIFLPCVSSLVAYSVLFKGMFAT- 133

Query: 142 NGLIGQFFQMFGAQA---PNLLSADAMLFSISNIARWCFMGYNMLIFYASLRVIPGELYE 198
           +G++    Q  G  A   P L         +     W + GYNM+ + A+L+ I   +YE
Sbjct: 134 DGIVNSTLQAIGLAASPIPWLTHPFWAKVLVILAITWRWTGYNMIFYLAALQNIDKSIYE 193

Query: 199 SARIDGASEFRIAWSVKIPMIRSTVIMTLLFSIIGSYQLFNEPNILKTLVPEVINSYYTP 258
            ARIDG   +     + IP+++  ++ T + S IG+ QLF+E   L        N+  T 
Sbjct: 194 VARIDGVPAWARLTHLTIPLLKPVILFTTVISTIGTLQLFDEVYNLTEGKGGPSNATLTL 253

Query: 259 NMYTYNLAFTGQ-DINYAAAVSLVVGSITMLIVAAVKLFGSRWEER 303
           ++Y YNL F    ++ YAA VS V+  + + ++A V+ F +R  +R
Sbjct: 254 SLYIYNLTFRFMPNLGYAATVSYVI-VVLVALLAFVQFFAARERDR 298