Pairwise Alignments

Query, 303 a.a., sugar ABC transporter permease from Bifidobacterium breve UCC2003

Subject, 305 a.a., sugar uptake ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  130 bits (327), Expect = 4e-35
 Identities = 82/298 (27%), Positives = 158/298 (53%), Gaps = 7/298 (2%)

Query: 2   THAADGDARMPLRKEKQQYVGMLYCLPYVVVFLMGTILPILYALYLSFFKERMVGGSRFV 61
           T A     R    K +  + G++Y  P + +  +  +LP+L+ L++S  K  ++G   ++
Sbjct: 3   TSALTSATRRRRPKRQAGWRGLIYIAPAMALVTLFFVLPVLFTLWMSLHKWPLLGEPAWI 62

Query: 62  GLKNFVRAVSDAKLWESFGRVSLYFLIQVPLMLALALLAALILDSGRIRHIAIPRMLLFL 121
           GL+N+ R  +DA+ + + G  + Y LI    + A+A   A+ ++  R   +++ R ++FL
Sbjct: 63  GLRNYTRMFTDARFFNALGFTAHYTLIVTIAIFAVAFPLAIFVEKQRPL-VSLYRTIVFL 121

Query: 122 PYAVPGVIAALMWGYIYGQRNGLIGQFFQMFGAQAP--NLLSA-DAMLFSISNIARWCFM 178
           P  V    A+L+W ++    +GL    F M G  +   NLL+  D    +I  +  W   
Sbjct: 122 PVVVGLASASLLWVWLANVDSGLFAPLFDMLGLTSGRINLLAKFDTAFLTIIVMVVWKIA 181

Query: 179 GYNMLIFYASLRVIPGELYESARIDGASEFRIAWSVKIPMIRSTVIMTLLFSIIGSYQLF 238
           G+ M+I    L+ IP EL E+ARIDGA  ++    + +P++R T+ + L+ S+ GS   F
Sbjct: 182 GFTMIILLTGLQAIPAELTEAARIDGAGRWQRFRHLTLPLMRRTMALALILSVTGSILAF 241

Query: 239 NEPNILKTLVPEVINSYYTPNMYTYNLAFTGQDINYAAAVSLVVGSITMLIVAAVKLF 296
           ++  I+ +  P+  N   +   Y +N +F   ++ Y AA+S+ +  + ++ ++ V+L+
Sbjct: 242 DQFYIMTSGGPQ--NKMISVVYYIFNQSFVSFNLGYGAALSIAL-LLILVTLSVVQLW 296